From: Jimmy E. <en...@us...> - 2007-03-19 04:08:45
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Update of /cvsroot/sashimi/misc In directory sc8-pr-cvs8.sourceforge.net:/tmp/cvs-serv32290 Modified Files: subsetdb1.c Log Message: bandaid fix - change fgets line read size to 50k characters to accomodate the long definition lines in fasta files such as NCBI's NR. Index: subsetdb1.c =================================================================== RCS file: /cvsroot/sashimi/misc/subsetdb1.c,v retrieving revision 1.7 retrieving revision 1.8 diff -C2 -d -r1.7 -r1.8 *** subsetdb1.c 1 Mar 2005 20:28:07 -0000 1.7 --- subsetdb1.c 19 Mar 2007 03:16:56 -0000 1.8 *************** *** 22,26 **** #define INIT_SEQ_LEN 1000 ! #define SIZE_BUF 8192 #define SIZE_FILE 1024 #define MAX_FILTER 500 --- 22,26 ---- #define INIT_SEQ_LEN 1000 ! #define SIZE_BUF 50000 #define SIZE_FILE 1024 #define MAX_FILTER 500 |