From: Michael Lerner <mglerner@gm...> - 2006-07-18 18:34:26
I have some stuff from an amber8 (sander) MD run that I'd like to
visualize in PyMOL. When I load it up, PyMOL says something like
"assuming amber6 format" and dies. I'm using fink/pymol-py24 on an
intel macbook pro. I always forget how to load amber files anyway, so
I could easily be screwing something up. I call my topology file
"something.top" and here's what happens:
ObjectMolecule: Assuming this is an Amber6 topology file.
TOPStrToCoordSet-Error: Error reading atom types
/sw/bin/pymol: line23: Bus error
I made that file with amber8.