From: Tara S. <tsp...@ua...> - 2003-06-20 18:35:31
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Hi, How does one display and access the multiple models found in a pdb file for a nmr structure from the command line? I have loaded in all the models, but cannot figure out how to specify them (ie in the format /model/segment...). Thanks, Tara Tara Sprules Post-Doctoral Fellow Department of Chemistry University of Alberta Edmonton, AB Canada |
From: Warren L. D. <wa...@de...> - 2003-06-24 18:56:07
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Tara, By default, PyMOL loads models as states rather than as separate molecular objects. That can make it hard for you to refer to any particular model. Using a discrete objects helps a bit with mouse-driven interaction, but the selection language doesn't do too well with molecular states. Some development will be required to address this. What would people like to see? Possibilities: A) A setting which loads MODEL records as independent objects. B) "state" keyword added to selection language (exists, but buggy) C) ??? Cheers, Warren -- mailto:wa...@de... Warren L. DeLano, Ph.D. Principal Scientist DeLano Scientific LLC Voice (650)-346-1154 Fax (650)-593-4020 > -----Original Message----- > From: pym...@li... [mailto:pymol-users- > ad...@li...] On Behalf Of Tara Sprules > Sent: Friday, June 20, 2003 10:35 AM > To: pym...@li... > Subject: [PyMOL] show model > > Hi, > > How does one display and access the multiple models found in a pdb file > for a nmr structure from the command line? I have loaded in all the > models, but cannot figure out how to specify them (ie in the format > /model/segment...). > > Thanks, > > Tara > > Tara Sprules > Post-Doctoral Fellow > Department of Chemistry > University of Alberta > Edmonton, AB > Canada > > > > > ------------------------------------------------------- > This SF.Net email is sponsored by: INetU > Attention Web Developers & Consultants: Become An INetU Hosting Partner. > Refer Dedicated Servers. We Manage Them. You Get 10% Monthly Commission! > INetU Dedicated Managed Hosting http://www.inetu.net/partner/index.php > _______________________________________________ > PyMOL-users mailing list > PyM...@li... > https://lists.sourceforge.net/lists/listinfo/pymol-users |