From: Jeffrey N. A. <ag...@ch...> - 2005-01-18 19:04:28
|
Greetings, There are two examples that I can find for loading the multiple frames (in my case of a morph between two structures) using a single command. In my case the frames are ff0.pdb thru ff30.pdb. I've been trying to substitute the my file names into the following example (from movie school). ls morph*pdb |awk '{print ("load",$0",mov,"NR)}' > load.pml becomes ls ff*.pdb |awk '{print ("load",$0",mov,"NR)}' > load.pml also, typing the following example from the users manual gives invalid syntax with an arrow pointing to the m in file_list =glob("mov*.pdb"): 2) The following is a Python program (with a .py or .pym extension) which uses a Python loop to load a large number of numbered PDB files, and then configures PyMOL to show them both forwards and backwards. from glob import glob from pymol import cmd file_list = glob("mov*.pdb"): for file in file_list cmd.load(file,"mov") cmd.mset("1 -%d -2"%len(file_list)) I obviously have no idea how to program. Sorry about that. I need canned commands to succeed. Thank you, Jeff |