Re: [PyMOL] sequence file extraction

[Robert C. <rob...@qu...>]

Hi Thomas,

On Tue, 2012-07-24 12:57  EDT,  Thomas Holder
<sp...@us...> wrote:

> Hi Stefano,
> 
> this is a known bug and it has not been fixed yet. A workaround is to 
> only save one object at a time to fasta format.
> 
> See bug report:
> http://sourceforge.net/tracker/?func=detail&aid=3466472&group_id=4546&atid=104546

Another bug (I guess I should report it via the bug tracker) is that if a
structure has multiple conformations (at least at the CA atom), then the
residue appears twice in the sequence.

Cheers,
Rob


-- 
Robert L. Campbell, Ph.D.
Senior Research Associate/Adjunct Assistant Professor 
Dept. of Biomedical & Molecular Sciences, Botterell Hall Rm 644
Queen's University, 
Kingston, ON K7L 3N6  Canada
Tel: 613-533-6821
<rob...@qu...>    http://pldserver1.biochem.queensu.ca/~rlc