Date: Wed, 10 Feb 2010 20:26:47 -0500
From: Michael Lerner <email@example.com>
Subject: [PyMOL] Showing electric field lines
To: pymol mailinglist <firstname.lastname@example.org>
Content-Type: text/plain; charset="iso-8859-1"
Someone recently asked me if there was a way to display field lines with
PyMOL or with an external plugin. Here's what I wrote:
It turns out that PyMOL recently grew the ability to display field lines.
After you've run APBS, you'll have a map object called pymol-generated. Try
this series of commands from the PyMOL prompt:
gradient my_grad, pymol-generated
ramp_new my_grad_ramp, pymol-generated
color my_grad_ramp, my_grad