Hello guys,

Regarding the subject mentioned above, I'm wondering if PDB file has more than one chain, will the generation of contact map using g_mdmat from Gromacs
still produce a map of all chains?

Don't I have a choice to choose one chain?

Refer the subject above for more details:
http://www.pymolwiki.org/index.php/Contact_map_visualizer

Cheers,
Suhaila.