Dear Pymol Users,

I am very pleased with my Debian system until today I found pymol cannot run scripts, which work fine on pymol-win.

This is the initialization information:
 Detected OpenGL version 2.0 or greater. Shaders available.
 Detected GLSL version 4.20.
 Adapting to Quadro hardware.
 Detected 8 CPU cores.  Enabled multithreaded rendering.

The message is like this:
 Scene: view updated.
*** glibc detected *** /usr/bin/python: realloc(): invalid next size: 0x0000000003bec340 ***
======= Backtrace: =========
/lib/x86_64-linux-gnu/libc.so.6(+0x76d76)[0x7f616dcb9d76]
/lib/x86_64-linux-gnu/libc.so.6(+0x7c94c)[0x7f616dcbf94c]
/lib/x86_64-linux-gnu/libc.so.6(realloc+0xf0)[0x7f616dcbfc60]
/usr/lib/x86_64-linux-gnu/libGL.so.1(+0xa90eb)[0x7f616c6750eb]
======= Memory map: ========
00400000-00658000 r-xp 00000000 08:0a 141416                             /usr/bin/python2.7
00857000-00858000 r--p 00257000 08:0a 141416                             /usr/bin/python2.7
00858000-008c1000 rw-p 00258000 08:0a 141416                             /usr/bin/python2.7
008c1000-008d3000 rw-p 00000000 00:00 0
0246a000-03fe6000 rw-p 00000000 00:00 0                                  [heap]
401b2000-401b4000 r-xs 00000000 08:0a 1849786                            /tmp/glHSIYOE (deleted)
401eb000-401ed000 r-xs 00000000 08:0a 1849795                            /tmp/glOTvv4v (deleted)
403b2000-403b4000 r-xs 00000000 08:0a 1849785                            /tmp/glM0vw4m (deleted)
40b01000-40b03000 r-xs 00000000 08:0a 1849787                            /tmp/glgyMszW (deleted)
40ee6000-40ee8000 r-xs 00000000 08:0a 1849788                            /tmp/gldriYje (deleted)
41d62000-41de0000 rw-p 00000000 00:00 0
7f615c000000-7f615c021000 rw-p 00000000 00:00 0
7f615c021000-7f6160000000 ---p 00000000 00:00 0
7f6162573000-7f61625c6000 rw-p 00000000 00:00 0
7f6162793000-7f616279b000 rw-p 00000000 00:00 0
7f6162b05000-7f6162b0d000 rw-p 00000000 00:00 0
7f6162c6d000-7f6162da2000 rw-p 00000000 00:00 0
7f6162ecf000-7f6162ed7000 r-xp 00000000 08:0a 141573                     /usr/lib/python2.7/lib-dynload/_ssl.so
7f6162ed7000-7f61630d6000 ---p 00008000 08:0a 141573                     /usr/lib/python2.7/lib-dynload/_ssl.so
7f61630d6000-7f61630d7000 r--p 00007000 08:0a 141573                     /usr/lib/python2.7/lib-dynload/_ssl.so
7f61630d7000-7f61630d8000 rw-p 00008000 08:0a 141573                     /usr/lib/python2.7/lib-dynload/_ssl.so
7f61630d8000-7f61630e3000 r-xp 00000000 08:0a 2490381                    /lib/x86_64-linux-gnu/libnss_files-2.13.so
7f61630e3000-7f61632e2000 ---p 0000b000 08:0a 2490381                    /lib/x86_64-linux-gnu/libnss_files-2.13.so
7f61632e2000-7f61632e3000 r--p 0000a000 08:0a 2490381                    /lib/x86_64-linux-gnu/libnss_files-2.13.so
7f61632e3000-7f61632e4000 rw-p 0000b000 08:0a 2490381                    /lib/x86_64-linux-gnu/libnss_files-2.13.so
7f61632e4000-7f61632ee000 r-xp 00000000 08:0a 2490393                    /lib/x86_64-linux-gnu/libnss_nis-2.13.so
7f61632ee000-7f61634ed000 ---p 0000a000 08:0a 2490393                    /lib/x86_64-linux-gnu/libnss_nis-2.13.so
7f61634ed000-7f61634ee000 r--p 00009000 08:0a 2490393                    /lib/x86_64-linux-gnu/libnss_nis-2.13.so
7f61634ee000-7f61634ef000 rw-p 0000a000 08:0a 2490393                    /lib/x86_64-linux-gnu/libnss_nis-2.13.so
7f61634ef000-7f61634f6000 r-xp 00000000 08:0a 2490383                    /lib/x86_64-linux-gnu/libnss_compat-2.13.so
7f61634f6000-7f61636f5000 ---p 00007000 08:0a 2490383                    /lib/x86_64-linux-gnu/libnss_compat-2.13.so
7f61636f5000-7f61636f6000 r--p 00006000 08:0a 2490383                    /lib/x86_64-linux-gnu/libnss_compat-2.13.so
7f61636f6000-7f61636f7000 rw-p 00007000 08:0a 2490383                    /lib/x86_64-linux-gnu/libnss_compat-2.13.so
7f61636f7000-7f61636f8000 ---p 00000000 00:00 0
7f61636f8000-7f6163ef8000 rw-p 00000000 00:00 0
7f6163ef8000-7f6163ef9000 ---p 00000000 00:00 0
7f6163ef9000-7f61646f9000 rw-p 00000000 00:00 0
7f61646f9000-7f6164720000 r-xp 00000000 08:0a 2494127                    /lib/x86_64-linux-gnu/libexpat.so.1.6.0
7f6164720000-7f6164920000 ---p 00027000 08:0a 2494127                    /lib/x86_64-linux-gnu/libexpat.so.1.6.0
7f6164920000-7f6164922000 r--p 00027000 08:0a 2494127                    /lib/x86_64-linux-gnu/libexpat.so.1.6.0
7f6164922000-7f6164923000 rw-p 00029000 08:0a 2494127                    /lib/x86_64-linux-gnu/libexpat.so.1.6.0
7f6164923000-7f616492c000 r-xp 00000000 08:0a 139229                     /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7f616492c000-7f6164b2b000 ---p 00009000 08:0a 139229                     /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7f6164b2b000-7f6164b2c000 rw-p 00008000 08:0a 139229                     /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7f6164b2c000-7f6164b61000 r-xp 00000000 08:0a 138977                     /usr/lib/x86_64-linux-gnu/libfontconfig.so.1.5.0
7f6164b61000-7f6164d61000 ---p 00035000 08:0a 138977                     /usr/lib/x86_64-linux-gnu/libfontconfig.so.1.5.0
7f6164d61000-7f6164d62000 r--p 00035000 08:0a 138977                     /usr/lib/x86_64-linux-gnu/libfontconfig.so.1.5.0
7f6164d62000-7f6164d63000 rw-p 00036000 08:0a 138977                     /usr/lib/x86_64-linux-gnu/libfontconfig.so.1.5.0
7f6164d63000-7f6164d77000 r-xp 00000000 08:0a 139675                     /usr/lib/x86_64-linux-gnu/libXft.so.2.3.1
7f6164d77000-7f6164f77000 ---p 00014000 08:0a 139675                     /usr/lib/x86_64-linux-gnu/libXft.so.2.3.1
7f6164f77000-7f6164f78000 rw-p 00014000 08:0a 139675                     /usr/lib/x86_64-linux-gnu/libXft.so.2.3.1
7f6164f78000-7f6164f7a000 r-xp 00000000 08:0a 146371                     /usr/lib/x86_64-linux-gnu/libXss.so.1.0.0
7f6164f7a000-7f616517a000 ---p 00002000 08:0a 146371                     /usr/lib/x86_64-linux-gnu/libXss.so.1.0.0
7f616517a000-7f616517b000 rw-p 00002000 08:0a 146371                     /usr/lib/x86_64-linux-gnu/libXss.so.1.0.0
7f616517b000-7f6165190000 r-xp 00000000 08:0a 2490391                    /lib/x86_64-linux-gnu/libnsl-2.13.so
7f6165190000-7f616538f000 ---p 00015000 08:0a 2490391                    /lib/x86_64-linux-gnu/libnsl-2.13.so
7f616538f000-7f6165390000 r--p 00014000 08:0a 2490391                    /lib/x86_64-linux-gnu/libnsl-2.13.so
7f6165390000-7f6165391000 rw-p 00015000 08:0a 2490391                    /lib/x86_64-linux-gnu/libnsl-2.13.so
7f6165391000-7f6165393000 rw-p 00000000 00:00 0
7f6165393000-7f61654a7000 r-xp 00000000 08:0a 161724                     /usr/lib/libtcl8.5.so.0
7f61654a7000-7f61656a6000 ---p 00114000 08:0a 161724                     /usr/lib/libtcl8.5.so.0
7f61656a6000-7f61656aa000 r--p 00113000 08:0a 161724                     /usr/lib/libtcl8.5.so.0
7f61656aa000-7f61656b2000 rw-p 00117000 08:0a 161724                     /usr/lib/libtcl8.5.so.0
7f61656b2000-7f61656b3000 rw-p 00000000 00:00 0
7f61656b3000-7f61657de000 r-xp 00000000 08:0a 161729                     /usr/lib/libtk8.5.so.0
7f61657de000-7f61659dd000 ---p 0012b000 08:0a 161729                     /usr/lib/libtk8.5.so.0
7f61659dd000-7f61659e8000 r--p 0012a000 08:0a 161729                     /usr/lib/libtk8.5.so.0
7f61659e8000-7f61659fc000 rw-p 00135000 08:0a 161729                     /usr/lib/libtk8.5.so.0
7f61659fc000-7f61659fd000 rw-p 00000000 00:00 0
7f61659fd000-7f6165b00000 r-xp 00000000 08:0a 161731                     /usr/lib/libBLT.2.4.so.8.5
7f6165b00000-7f6165d00000 ---p 00103000 08:0a 161731                     /usr/lib/libBLT.2.4.so.8.5
7f6165d00000-7f6165d1d000 rw-p 00103000 08:0a 161731                     /usr/lib/libBLT.2.4.so.8.5
7f6165d1d000-7f6165d1e000 rw-p 00000000 00:00 0
7f6165d1e000-7f6165d2a000 r-xp 00000000 08:0a 161760                     /usr/lib/python2.7/lib-dynload/_tkinter.so
7f6165d2a000-7f6165f29000 ---p 0000c000 08:0a 161760                     /usr/lib/python2.7/lib-dynload/_tkinter.so
7f6165f29000-7f6165f2a000 r--p 0000b000 08:0a 161760                     /usr/lib/python2.7/lib-dynload/_tkinter.so
7f6165f2a000-7f6165f2c000 rw-p 0000c000 08:0a 161760                     /usr/lib/python2.7/lib-dynload/_tkinter.so
7f6165f2c000-7f616612c000 rw-s 165d2f000 00:05 10285                     /dev/nvidia0
7f616612c000-7f6166235000 rw-p 00000000 00:00 0
7f6166327000-7f616632f000 rw-p 00000000 00:00 0
7f616632f000-7f6166336000 r--s 00000000 08:0a 131134                     /usr/lib/x86_64-linux-gnu/gconv/gconv-modules.cache
7f6166336000-7f6166347000 rw-p 00000000 00:00 0
7f6166347000-7f6166747000 rw-s 14fcfb000 00:05 10285                     /dev/nvidia0
7f6166747000-7f6166b47000 rw-s 165fe6000 00:05 10285                     /dev/nvidia0
7f6166b47000-7f6166f47000 rw-s 14dc8b000 00:05 10285                     /dev/nvidia0
7f6166f47000-7f6166f4b000 rw-s 165e0d000 00:05 10285                     /dev/nvidia0
7f6166f4b000-7f6166f6b000 rw-s e00c0000 00:05 10285                      /dev/nvidia0
7f6166f6b000-7f6166fab000 rw-s 17434c000 00:05 10285                     /dev/nvidia0
7f6166fab000-7f6166fcb000 rw-s 16b678000 00:05 10285                     /dev/nvidia0
7f6166fcb000-7f6166fcc000 rw-s efd60000 00:05 10285                      /dev/nvidia0
7f6166fcc000-7f616700c000 rw-s 16b5f2000 00:05 10285                     /dev/nvidia0
7f616700c000-7f616702c000 rw-s 195dab000 00:05 10285                     /dev/nvidia0
7f616702c000-7f6167193000 rw-p 00000000 00:00 0
7f6167193000-7f61671b2000 r-xp 00000000 08:0a 141899                     /usr/lib/python2.7/lib-dynload/_io.so
7f61671b2000-7f61673b1000 ---p 0001f000 08:0a 141899                     /usr/lib/python2.7/lib-dynload/_io.so
7f61673b1000-7f61673b2000 r--p 0001e000 08:0a 141899                     /usr/lib/python2.7/lib-dynload/_io.so
7f61673b2000-7f61673bb000 rw-p 0001f000 08:0a 141899                     /usr/lib/python2.7/lib-dynload/_io.so
7f61673bb000-7f616747c000 rw-p 00000000 00:00 0
7f616747c000-7f6167633000 r-xp 00000000 08:0a 135409                     /usr/lib/x86_64-linux-gnu/libcrypto.so.1.0.0
7f6167633000-7f6167832000 ---p 001b7000 08:0a 135409                     /usr/lib/x86_64-linux-gnu/libcrypto.so.1.0.0
7f6167832000-7f616784d000 r--p 001b6000 08:0a 135409                     /usr/lib/x86_64-linux-gnu/libcrypto.so.1.0.0
7f616784d000-7f616785c000 rw-p 001d1000 08:0a 135409                     /usr/lib/x86_64-linux-gnu/libcrypto.so.1.0.0
7f616785c000-7f6167860000 rw-p 00000000 00:00 0
7f6167860000-7f61678b6000 r-xp 00000000 08:0a 135410                     /usr/lib/x86_64-linux-gnu/libssl.so.1.0.0
7f61678b6000-7f6167ab5000 ---p 00056000 08:0a 135410                     /usr/lib/x86_64-linux-gnu/libssl.so.1.0.0
7f6167ab5000-7f6167ab8000 r--p 00055000 08:0a 135410                     /usr/lib/x86_64-linux-gnu/libssl.so.1.0.0
7f6167ab8000-7f6167abf000 rw-p 00058000 08:0a 135410                     /usr/lib/x86_64-linux-gnu/libssl.so.1.0.0
7f6167abf000-7f6167ac2000 r-xp 00000000 08:0a 141574                     /usr/lib/python2.7/lib-dynload/_hashlib.so
7f6167ac2000-7f6167cc2000 ---p 00003000 08:0a 141574                     /usr/lib/python2.7/lib-dynload/_hashlib.so
7f6167cc2000-7f6167cc3000 r--p 00003000 08:0a 141574                     /usr/lib/python2.7/lib-dynload/_hashlib.so
7f6167cc3000-7f6167cc4000 rw-p 00004000 08:0a 141574                     /usr/lib/python2.7/lib-dynload/_hashlib.so
7f6167cc4000-7f6167d85000 rw-p 00000000 00:00 0
7f6167d85000-7f6167d89000 r-xp 00000000 08:0a 2490437                    /lib/x86_64-linux-gnu/libuuid.so.1.3.0
7f6167d89000-7f6167f88000 ---p 00004000 08:0a 2490437                    /lib/x86_64-linux-gnu/libuuid.so.1.3.0
7f6167f88000-7f6167f89000 r--p 00003000 08:0a 2490437                    /lib/x86_64-linux-gnu/libuuid.so.1.3.0
7f6167f89000-7f6167f8a000 rw-p 00004000 08:0a 2490437                    /lib/x86_64-linux-gnu/libuuid.so.1.3.0
7f6167f8a000-7f6167fa1000 r-xp 00000000 08:0a 141031                     /usr/lib/x86_64-linux-gnu/libICE.so.6.3.0
7f6167fa1000-7f61681a0000 ---p 00017000 08:0a 141031                     /usr/lib/x86_64-linux-gnu/libICE.so.6.3.0
7f61681a0000-7f61681a2000 rw-p 00016000 08:0a 141031                     /usr/lib/x86_64-linux-gnu/libICE.so.6.3.0
7f61681a2000-7f61681a5000 rw-p 00000000 00:00 0
7f61681a5000-7f61681ac000 r-xp 00000000 08:0a 141033                     /usr/lib/x86_64-linux-gnu/libSM.so.6.0.1
7f61681ac000-7f61683ab000 ---p 00007000 08:0a 141033                     /usr/lib/x86_64-linux-gnu/libSM.so.6.0.1
7f61683ab000-7f61683ac000 rw-p 00006000 08:0a 141033                     /usr/lib/x86_64-linux-gnu/libSM.so.6.0.1Aborted

Does anybody have any ideas?

Thank you so much!

Best,
Chen