Hi,
 
In the past I was using rigimol to morph my structures.
I used to follow the path

pymol -qc prepare.pml

pymol -qc rigimol.pml

pymol domains.pml

pymol -qc refine.py

pymol view.pml

 

I lost my old pml files and in the current pymolv1.5 as far as I can see rigimol (or any of the pml files) doesn't exist anymore.
I have two structures and they are dramatically different from one another due to a mutation.
I would be grateful if you can help me with the morphing and refinement scripts in pymolv1.5 (both windows 64 and/or linux 64 version is fine).
With my very best regards.
 
Hasan-