On Wed, Sep 21, 2011 at 11:47 AM, Suda Ravindran <biobudhan@gmail.com> wrote:

I would like to know if there is any option in PyMol to count the number of helices and sheets present in the structure.????

Please help me out..

I tried run dssp (plugins), the output on the windows as shown below, not sure it's you were looking for or not.

 Number of residues with SSE eleme
         Alpha helix (H) :     5
          3-10 helix (G) :     0
            Pi helix (I) :     0
     Extended strand (E) :    19
Isolated beta-bridge (B) :     7
                Turn (T) :    11
                Bend (S) :     9
                None (-) :    31


All the data continuously generated in your IT infrastructure contains a
definitive record of customers, application performance, security
threats, fraudulent activity and more. Splunk takes this data and makes
sense of it. Business sense. IT sense. Common sense.
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net

Best Regards,