On Wed, Sep 21, 2011 at 11:47 AM, Suda Ravindran <biobudhan@gmail.com> wrote:
Hi,

I would like to know if there is any option in PyMol to count the number of helices and sheets present in the structure.????

Please help me out..

I tried run dssp (plugins), the output on the windows as shown below, not sure it's you were looking for or not.

 Number of residues with SSE eleme
         Alpha helix (H) :     5
          3-10 helix (G) :     0
            Pi helix (I) :     0
     Extended strand (E) :    19
Isolated beta-bridge (B) :     7
                Turn (T) :    11
                Bend (S) :     9
                None (-) :    31

-Suda

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--
Best Regards,

lina