I would be interested in just how the problem has been solved!

I just installed caver v-2.1.2 in the 64 bit Debian Testing with PyMOL v- compiled from the latest svn and functioning perfectly on my system.

Carver installed from the PyMOL wicki via the PyMOL Plugin Manager without any complaints.  Yet when I try to use the plugin I get:

ERROR: Directory incorrectly specified -plugin.jar not found, check directory/where/jar/with/plugin/is/locate/Carver2_1.jar

Both Carver2_1_2.py and Carver2_1_2.pyc are in the startup subdirectory.  Also other plugins are working without complaint.

This is exactly the way the plug was working the last time that I attempted its installation and use.

On 11/15/2013 03:14 PM, James Starlight wrote:
This issue have been solved. Caver works fine. Does anyone tried to include path information obtained by caver to the NAMD steered md simulation? I'm looking for the protocol for guiding namd forces along the direction obtaned from CAVER.


2013/11/15 James Starlight <jmsstarlight@gmail.com>
Dear Pymol Users!

In the latest 3.0 releases of the CAVER plugin lack the source path for the caver.jar launch file. Could you tell me how I could define this path manually from pymol shell? I've try to make calculations with thus plugin having Caver 3.0 dir in the work folder but obtained error that /where/caver3 not found

Thanks for help


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