I am trying to use msconvert for conversion of Waters RAW files to the mzXML format, but I get wrong m/z values in my mzXML files (see screen shot attached). The basepeak m/z is however correctly recognized (see bottom table in the screen shot).
Command used for conversion:
msconvert.exe --mzXML -v --filter "scanEvent [1,1]" DW522.raw
ProteoWizard release 2.2.3073
On WindowsXP SP3