Learn how easy it is to sync an existing GitHub or Google Code repo to a SourceForge project! See Demo

Close

#98 add brain structures

None
open
Ceri
5
2015-03-03
2013-01-11
Ceri
No

stria medullaris
bed nucleus of the stria medullaris (BNSM)
from ZDB-PUB-120709-5

Discussion

  • Chris Mungall
    Chris Mungall
    2013-01-12

    In case it's useful, here's the uberon def (not vetted - the assumption this is conserved across vertebrrates comes from a setence in Butler & Hodos)

    [Term]
    id: UBERON:0006086
    name: stria medullaris
    def: "The major afferent track to the habenula from the telencephalon (particularly in the septal side) in all vertebrates[Butler and Hodos]." [ISBN10:0471888893]
    synonym: "stria habenularis" EXACT [NIF_GrossAnatomy:birnlex_1066]
    synonym: "stria medullaris of thalamus" EXACT [NIF_GrossAnatomy:birnlex_1066, FMA:62080]
    synonym: "stria medullaris thalami" EXACT PLURAL [NIF_GrossAnatomy:birnlex_1066]
    synonym: "stria medullaris thalamica" EXACT [NIF_GrossAnatomy:birnlex_1066]
    synonym: "stria medullaris (wenzel - wenzel)" EXACT [NIF_GrossAnatomy:birnlex_1066]
    xref: FMA:62080 ! stria medullaris of thalamus
    xref: NIF_GrossAnatomy:birnlex_1066 ! Stria medullaris
    xref: BM:Die-SM ! stria medullaris of thalamus
    is_a: UBERON:0013199 {source="FMA"} ! stria of neuraxis
    relationship: part_of UBERON:0001893 ! telencephalon
    relationship: present_in_taxon NCBITaxon:7742 {source="ISBN10:0471888893"} ! Vertebrata
    relationship: overlaps UBERON:0001904 ! habenula
    xref: SCTID:362368004 ! Entire stria medullaris
    property_value: external_definition "Stria medullaris of thalamus is a slender fiber bundle on the dorsal surface of the diencephalon which terminates posteriorly in the habenular nuclei[FMA:62080]." xsd:string {source="FMA:62080"}

    The only resource I know with the bed nuclei is:
    http://neurolex.org/wiki/Category:Bed_nucleus_of_the_stria_medullaris
    neurolex is by default mammal-centric. It's a wiki so if you have interesting phylogenetic facts you could add them here.

     
  • Leyla
    Leyla
    2013-01-25

    Additional reference: ZDB-PUB-090814-14

     
  • Leyla
    Leyla
    2013-02-07

    Additional reference: ZDB-PUB-090914-27 (Mueller and Wulliman 2009; An evolutionary interpretation of teleostean forebrain anatomy).

     
  • Ceri
    Ceri
    2013-08-02

    ZDB-PUB-090814-14
    The GAD67-positive (dorsal) entopeduncular
    nucleus (EN  former ENd) appears to be anatomically
    separate from the GAD67-negative bed nucleus of the
    stria medullaris (BNSM), which was formerly called the ventral
    part of the entopeduncular nucleus (ENv)

    Right now we have ventral entopeduncular nucleus of ventral telencephalon which may need to be renamed. Topic needs more research.

     
  • Ceri
    Ceri
    2013-08-29

    • labels: new term request --> new term request
    • assigned_to: Ceri
    • Group: -->
     
  • Leyla
    Leyla
    2015-03-03

    Two additional nuclei (the "reticular thalamic nucleus" and the "intercalated nucleus") are described in ZDB-PUB-090814-14:

    "The anterior thalamic nucleus is laterally bordered by a distinct GAD67-expressing cell population, which we interpret as the previously unidentified reticular thalamic nucleus (RTN) of teleosts. Furthermore, we identified a GAD67-positive thalamic nucleus, the intercalated nucleus (IC), which is sandwiched between the GAD67-negative dorsal (DP) and central posterior (CP) thalamic nuclei."