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#9 reorganisation of upper levels of hierarchy

closed
None
6
2007-03-01
2006-02-22
Chris Mungall
No

I would like to propose a hierarchical reorganisation
of PATO to make
it more ontologically sound, faster to search, and to
ensure that the
is_a hierarchy is reflected in the definitions.

Details will be worked out by Michael, George, CBio
core 5 and
myself. More to follow.

One idea would be to group qualities by the level of
granularity of
the entities in which they inhere . Another is to
cleanly separate
process qualities from qualities that inhere in 3D objects.

WHEN: phase 3, ongoing. Should not in general affect
annotations, but
will affect the annotation process, as annotators will
expect a tree
structure that is both intuitive to navigate and stable.

Discussion

  • Chris Mungall
    Chris Mungall
    2006-08-27

    • priority: 4 --> 6
    • assigned_to: nobody --> gkoutos
     
  • Chris Mungall
    Chris Mungall
    2006-08-27

    Logged In: YES
    user_id=254723

    george, what do you think of my proposed rearrangement?

     
    • status: open --> closed