[Obo-phenotype-commits] obo/ontology/phenotype/plant_traits plant_trait.obo, 1.446, 1.447

[Seth C. <sjc...@us...>]

Update of /cvsroot/obo/obo/ontology/phenotype/plant_traits
In directory vz-cvs-4.sog:/tmp/cvs-serv24437/phenotype/plant_traits

Modified Files:
	plant_trait.obo 
Log Message:
Automated file update

Index: plant_trait.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/plant_traits/plant_trait.obo,v
retrieving revision 1.446
retrieving revision 1.447
diff -C2 -d -r1.446 -r1.447
*** plant_trait.obo	21 Nov 2012 09:03:11 -0000	1.446
--- plant_trait.obo	22 Nov 2012 09:03:09 -0000	1.447
***************
*** 1,4 ****
  format-version: 1.2
! date: 20:11:2012 16:05
  saved-by: moorel
  auto-generated-by: OBO-Edit 2.2
--- 1,4 ----
  format-version: 1.2
! date: 21:11:2012 14:19
  saved-by: moorel
  auto-generated-by: OBO-Edit 2.2
***************
*** 4505,4509 ****
  is_a: TO:0000168 ! abiotic stress trait
  is_a: TO:0000361 ! stem anatomy and morphology trait
- is_a: TO:0000654 ! shoot development trait
  relationship: part_of TO:0000207 ! plant height
  
--- 4505,4508 ----
***************
*** 7253,7256 ****
--- 7252,7256 ----
  comment: Refer to shape (PATO:0000052): A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc).
  synonym: "core shape" NARROW []
+ xref: OBO_SF_ID:3524919
  xref: OBO_SF_ID:3544731
  xref: PATO:0000052
***************
*** 7506,7512 ****
  id: TO:0001036
  name: stem senescence
! def: "A measurement of aging of stem." [GR:cwt]
  synonym: "culm senescence" RELATED []
! is_a: TO:0000361 ! stem anatomy and morphology trait
  
  [Term]
--- 7506,7512 ----
  id: TO:0001036
  name: stem senescence
! def: "This term has been obsoleted. Please refer to stem senescence (TO:0020085)." [GR:cwt, TO:moorel]
  synonym: "culm senescence" RELATED []
! is_obsolete: true
  
  [Term]
***************
*** 7732,7748 ****
  name: fruit anatomy and morphology trait
  def: "A multi-tissue plant structure anatomy and morphology trait (TO:0000836) which is associated with a fruit (PO:0009001)." [GR:pj, PO:0009001, TO:moorel]
! synonym: "berry" NARROW []
! synonym: "capsule" NARROW []
! synonym: "caryopsis" NARROW []
! synonym: "citrus fruit" NARROW []
  synonym: "fruit anatomy and morphology trait" RELATED []
  synonym: "fruit morphology" RELATED []
! synonym: "grain" NARROW []
! synonym: "kernel" NARROW []
! synonym: "nut" NARROW []
! synonym: "pepo" NARROW []
! synonym: "pod" NARROW []
! synonym: "silique" NARROW []
! synonym: "stone fruit" NARROW []
  is_a: TO:0000836 ! multi-tissue plant structure anatomy and morphology trait
  
--- 7732,7748 ----
  name: fruit anatomy and morphology trait
  def: "A multi-tissue plant structure anatomy and morphology trait (TO:0000836) which is associated with a fruit (PO:0009001)." [GR:pj, PO:0009001, TO:moorel]
! synonym: "berry anatomy and morphology trait  " NARROW []
! synonym: "capsule anatomy and morphology trait " NARROW []
! synonym: "caryopsis anatomy and morphology trait" NARROW []
! synonym: "citrus fruit anatomy and morphology trait" NARROW []
  synonym: "fruit anatomy and morphology trait" RELATED []
  synonym: "fruit morphology" RELATED []
! synonym: "grain anatomy and morphology trait" NARROW []
! synonym: "kernel anatomy and morphology trait" NARROW []
! synonym: "nut anatomy and morphology trait" NARROW []
! synonym: "pepo anatomy and morphology trait" NARROW []
! synonym: "pod anatomy and morphology trait" NARROW []
! synonym: "silique anatomy and morphology trait" NARROW []
! synonym: "stone fruit anatomy and morphology trait" NARROW []
  is_a: TO:0000836 ! multi-tissue plant structure anatomy and morphology trait
  
***************
*** 10173,10178 ****
  id: TO:0020085
  name: stem senescence
! def: "A trait to measure the stem senescence." [GR:pj]
  synonym: "culm senescence" EXACT []
  is_a: TO:0000654 ! shoot development trait
  created_by: jaiswalp
--- 10173,10181 ----
  id: TO:0020085
  name: stem senescence
! def: "A shoot development trait (TO:0000654) to measure the senescence of a stem (PO:0009047)." [GR:pj, PO:0009047, TO:moorel]
! comment: Refer to organ senescence (GO:0010260): The process that occurs in an organ near the end of its active life that is associated with the dismantling of cell components and membranes, and an overall decline in metabolism. An example of this process is found in Arabidopsis thaliana.
  synonym: "culm senescence" EXACT []
+ xref: GO:0010260
+ xref: OBO_SF_ID:3531323
  is_a: TO:0000654 ! shoot development trait
  created_by: jaiswalp