From: <obo...@go...> - 2011-05-27 09:35:08
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Comment #3 on issue 28 by dosu...@gmail.com: Axioms not being translated from OWL to OBO. http://code.google.com/p/oboformat/issues/detail?id=28 Hi Shahid - thanks for fixing so quickly. But note - fixed for relationships (OWL SubClassOf), but not for intersections. In fact, something weirder seems to be going on with intersections - ------ ontology: test [Term] id: FBbt:00000457 name: midgut constriction def: "Constriction forming in the embryonic midgut between stage 15 and 16 caused by contraction of the mesoderm which, as a result, penetrates the underlying endoderm." [FlyBase:FBrf0051566] subset: cur intersection_of: FBbt:00007010 ! multi-tissue structure intersection_of: BFO:0000050 FBbt:00005333 ! late embryo intersection_of: BFO:0000050 FBbt:00005628 ! embryonic midgut chamber [Typedef] id: BFO:0000050 name: part_of is_transitive: true is_a: RO:0002131 ------ -> OBO2OWL -> OWL2OBO => ------ ontology: test [Term] id: FBbt:00000457 name: midgut constriction def: "Constriction forming in the embryonic midgut between stage 15 and 16 caused by contraction of the mesoderm which, as a result, penetrates the underlying endoderm." [FlyBase:FBrf0051566] subset: cur intersection_of: FBbt:00000457 [Typedef] id: BFO:0000050 name: part_of is_transitive: true is_a: RO:0002131 ------ Note, after conversion - intersection_of: self. Intermediate OWL looks fine to me. |