[Obo-phenotype-commits] obo/ontology/phenotype/phenotype_xp human_phenotype_xp.obo, 1.172, 1.173

[Georgios V. G. <gk...@us...>]

Update of /cvsroot/obo/obo/ontology/phenotype/phenotype_xp
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv12658

Modified Files:
	human_phenotype_xp.obo 
Log Message:
update

Index: human_phenotype_xp.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/phenotype_xp/human_phenotype_xp.obo,v
retrieving revision 1.172
retrieving revision 1.173
diff -C2 -d -r1.172 -r1.173
*** human_phenotype_xp.obo	30 Nov 2009 14:41:25 -0000	1.172
--- human_phenotype_xp.obo	30 Nov 2009 14:49:07 -0000	1.173
***************
*** 2570,2579 ****
  intersection_of: inheres_in FMA:7956 ! costochondral joint
  
- [Term]
- id: HP:0010231 ! Enlarged epiphyses of the phalanges of the hand
- intersection_of: PATO:0000586 ! increased size
- intersection_of: inheres_in_part_of FMA:23914 ! Phalanx of finger
- intersection_of: inheres_in FMA:24012 ! Epiphysis
- 
  ![Term]
  !id: HP:0010229 ! Bracket epiphyses of the phalanges of the hand
--- 2570,2573 ----
***************
*** 2583,2598 ****
  
  [Term]
- id: HP:0010232 ! Fragmentation of the epiphyses of the phalanges of the hand
- intersection_of: PATO:0001444 ! broken
- intersection_of: inheres_in_part_of FMA:23914 ! Phalanx of finger
- intersection_of: inheres_in FMA:24012 ! Epiphysis
- 
- [Term]
  id: HP:0005920 ! Abnormality of the epiphyses of the phalanges of the hand
  intersection_of: PATO:0000001 ! quality
! intersection_of: inheres_in_part_of FMA:23914 ! Phalanx of finger
! intersection_of: inheres_in FMA:24012 ! Epiphysis
  intersection_of: qualifier PATO:0000460 ! abnormal
  
  ! HP:0005924 and HP:0005920 should be merged
  
--- 2577,2587 ----
  
  [Term]
  id: HP:0005920 ! Abnormality of the epiphyses of the phalanges of the hand
  intersection_of: PATO:0000001 ! quality
! intersection_of: OBO_REL:inheres_in_part_of FMA:9666 ! finger
! intersection_of: inheres_in FMA:240707 ! Epiphysis of phalanx of finger
  intersection_of: qualifier PATO:0000460 ! abnormal
  
+ 
  ! HP:0005924 and HP:0005920 should be merged
  
***************
*** 2600,2605 ****
  id: HP:0005924 ! Abnormality of the epiphyses of the hand
  intersection_of: PATO:0000001 ! quality
! intersection_of: inheres_in_part_of FMA:23914 ! Phalanx of finger
! intersection_of: inheres_in FMA:24012 ! Epiphysis
  intersection_of: qualifier PATO:0000460 ! abnormal
  
--- 2589,2594 ----
  id: HP:0005924 ! Abnormality of the epiphyses of the hand
  intersection_of: PATO:0000001 ! quality
! intersection_of: OBO_REL:inheres_in_part_of FMA:9666 ! finger
! intersection_of: inheres_in FMA:240707 ! Epiphysis of phalanx of finger
  intersection_of: qualifier PATO:0000460 ! abnormal
  
***************
*** 18782,18793 ****
  
  [Term]
! id: HP:0005920 ! Abnormality of the epiphyses of the fingers
! intersection_of: PATO:0000001 ! quality
! intersection_of: OBO_REL:inheres_in_part_of FMA:9666 ! finger
! intersection_of: inheres_in FMA:240707 ! Epiphysis of phalanx of finger
! intersection_of: qualifier PATO:0000460 ! abnormal
! 
! [Term]
! id: HP:0010232 ! Fragmentation of the epiphyses of the fingers
  intersection_of: PATO:0001444 ! broken
  intersection_of: OBO_REL:inheres_in_part_of FMA:9666 ! finger
--- 18771,18775 ----
  
  [Term]
! id: HP:0010232 ! Fragmentation of the epiphyses of the phalanges of the hand
  intersection_of: PATO:0001444 ! broken
  intersection_of: OBO_REL:inheres_in_part_of FMA:9666 ! finger
***************
*** 18999,19007 ****
  
  [Term]
- id: HP:0010577 ! Absent epiphyses
- intersection_of: PATO:0001557 ! lacks all physical parts of type
- intersection_of: OBO_REL:towards FMA:24012 ! epiphysis
- 
- [Term]
  id: HP:0009410 ! Absent epiphyses of the 3rd finger
  intersection_of: PATO:0001557 ! lacking physical part
--- 18981,18984 ----
***************
*** 19016,19024 ****
  
  [Term]
- id: HP:0010587 ! Triangular epiphyses
- intersection_of: PATO:0001875 ! triangular
- intersection_of: OBO_REL:inheres_in FMA:24012 ! epiphysis
- 
- [Term]
  id: HP:0009416 ! Ivory epiphyses of the 3rd finger
  intersection_of: PATO:0002149 ! ivory
--- 18993,18996 ----
***************
*** 19039,19048 ****
  
  [Term]
! id: HP:0010230 ! Cone-shaped epiphyses of the fingers
! intersection_of: PATO:0002021 ! conical
! intersection_of: inheres_in FMA:240707 ! Epiphysis of phalanx of finger
! 
! [Term]
! id: HP:0010231 ! Enlarged epiphyses of the fingers
  intersection_of: PATO:0000586 ! increased size
  intersection_of: inheres_in FMA:240707 ! Epiphysis of phalanx of finger
--- 19011,19015 ----
  
  [Term]
! id: HP:0010231 ! Enlarged epiphyses of the phalanges of the hand
  intersection_of: PATO:0000586 ! increased size
  intersection_of: inheres_in FMA:240707 ! Epiphysis of phalanx of finger