From: Brian J Haas <bhaas@br...> - 2010-12-12 14:08:55
A new version of CSlayer is released on sourceforge:
This version has improved bootstrap support calculation as follows:
Initial candidate chimeras are defined as before, requiring at least
90% bootstrap support using 100 bootstrap replicates.
Now, if a candidate has greater than 80% bootstrap support, it is
reevaluated using 1000 bootstrap replicates.
The new options and defaults are:
# --low_range_finer_BS (default: 10) If computed BS is between
minBS and (minBS - low_range_finer_BS), then num_finer_BS_replicates
# --num_finer_BS_replicates (default: 1000)
Brian J. Haas
Manager, Bioinformatics Outreach, Genome Annotation and Analysis
The Broad Institute