I’ve made the following commits to the 4_1_01 branch.

 

Nonpar.GUI.java //HCLDialog has metric menu

LinearExpressionMap.java //link out maps gene index properly when gene filters are applied

SOTAExperimentViewer  //header updated color endpoints improperly onMenuChanged()… fixed

PCA.java //just reordered the progress comments to reflect the computational process

brain-heart-kidney-liver_annotation.ann //added to ‘data’, we needed a sample .ann in the 4.1 distribution

annotation_URLs.txt //in ‘config’…, needed to update or add a url for gene Locus

 

These commits are also in the Trunk.

 

John

 

John Braisted
Software Engineer II
Pathogen Functional Genomics Resource Center (PFGRC)
J. Craig Venter Institute
9704 Medical Center Drive
Rockville, MD 20850