I was wondering if anyone knew the version of SAM that is included in MeV. I have noticed that I am getting different results when I run my data through SAM in excel, which is version 3.0 versus when I run it through SAM in MeV. Any suggestions?
It looks like our implementation of SAM is from the Tusher 2001 paper and hasn't been significantly changed since. We don't currently have concrete plans to upgrade it, but now that you've brought it up I'll put it on our list as a possibility for future releases.