I'm running the latest version of MeV on my MacBook Pro and have java3D installed. I'm having a couple of rendering problems:
1. The 3D PCA plot shows black data points on a black background (screenshot here: http://www.broadinstitute.org/~bhaas/mev_3dpca_blackdots_blackbkg.png ). Is there a way to have the data points be colored differently, or to change the background color? It's impossible to analyze data using this current coloring scheme.
2. The expression line graph (screenshot here: http://www.broadinstitute.org/~bhaas/mev_linegraph.png ) doesn't have a line connecting each of the neighboring data points. Is this a known problem, or a mac-specific issue?