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EdgeR issues on linux

Kate.W
2012-10-03
2013-05-20
  • Kate.W
    Kate.W
    2012-10-03

    Hello,

    I have been trying to run differential expression using the integrated edgeR module. When I launch EdgeR module, I get the following message:

    R JRI lib: /data/MeV_4_8_1/lib/libjri.sodoes not exist.

    Indeed, when I check the folder, there is no such file… I tried downloading it again, but no, no such file. Any hint? Thanks!

     
  • Martin Abba
    Martin Abba
    2012-11-17

    Hi Kate-w
    Did you solved the edgeR - linux issues?
    I have the same problem with all the RNAseq tools from MeV in Ubuntu.
    Best,
    Martin

     
  • Kate.W
    Kate.W
    2012-11-21

    Hi Martin,

    nope… I got tired of wasting my time after a while… It works well on PC though! If you have any solution, keep us posted! Cheers,

    K8