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[Matplotlib-users] Random Crashes Mac 10.6.7 - python 2.7 - 64 bits - matplotlib 1.0.1
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From: Sirdouille <si...@gm...> - 2011-05-13 14:48:58
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Hello everyone, I am having regular segmentation fault crashes using matplotlib under the configuration describes in the title. This is particularly annoying. I have not been able to identify a common pattern in the different things I do before it crashes (just regular plotting, resizing, xlabeling, ylabeling,...). I have python, numpy, scipy and matplotlib installed following the instructions given at http://www.bytemining.com/2011/03/instructions-for-installing-64bit-scipy-python-2-7-1-on-macos-x-10-6/ I have a bunch of diagnostic reports of the crashes ; I am not very sure of what I read in there. I have reported two of them below. If anybody has had a similar problem or knows how to read those reports, I would appreciate if you gave me a hint. Have a nice day, Sirdouille. ----------------------------------------------------------------------------------------------------------------- Process: Python [1999] Path: /Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python Identifier: org.python.python Version: 2.7.1 (2.7.1) Code Type: X86-64 (Native) Parent Process: bash [900] Date/Time: 2011-05-13 16:01:45.466 +0200 OS Version: Mac OS X 10.6.7 (10J869) Report Version: 6 Exception Type: EXC_BAD_ACCESS (SIGSEGV) Exception Codes: 0x000000000000000d, 0x0000000000000000 Crashed Thread: 0 Dispatch queue: com.apple.main-thread Application Specific Information: objc_msgSend() selector name: removeFromSuperviewWithoutNeedingDisplay Thread 0 Crashed: Dispatch queue: com.apple.main-thread 0 libobjc.A.dylib 0x00007fff807be13e objc_msgSend + 74 1 com.apple.CoreFoundation 0x00007fff86ec8d4e CFArrayApplyFunction + 222 2 com.apple.AppKit 0x00007fff82ee94cc -[NSView _finalizeWithReferenceCounting] + 831 3 com.apple.AppKit 0x00007fff82ee9164 -[NSView dealloc] + 38 4 com.apple.CoreFoundation 0x00007fff86ed21e6 _CFAutoreleasePoolPop + 230 5 com.apple.Foundation 0x00007fff82bc3ecb -[NSAutoreleasePool release] + 158 6 _macosx.so 0x0000000102b79f75 wait_for_stdin + 597 7 readline.so 0x00000001012cffc5 call_readline + 309 8 org.python.python 0x0000000100008ee2 PyOS_Readline + 274 9 org.python.python 0x00000001000b6a95 builtin_raw_input + 597 10 org.python.python 0x00000001000c124d PyEval_EvalFrameEx + 22397 11 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 12 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 13 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 14 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 15 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 16 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 17 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 18 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 19 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 20 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 21 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 22 org.python.python 0x00000001000c3066 PyEval_EvalCode + 54 23 org.python.python 0x00000001000e7b2e PyRun_FileExFlags + 174 24 org.python.python 0x00000001000e7de9 PyRun_SimpleFileExFlags + 489 25 org.python.python 0x00000001000fe75c Py_Main + 2940 26 org.python.python 0x0000000100000f14 0x100000000 + 3860 Thread 1: com.apple.CFSocket.private 0 libSystem.B.dylib 0x00007fff81820e52 select$DARWIN_EXTSN + 10 1 com.apple.CoreFoundation 0x00007fff86f0b498 __CFSocketManager + 824 2 libSystem.B.dylib 0x00007fff818164f6 _pthread_start + 331 3 libSystem.B.dylib 0x00007fff818163a9 thread_start + 13 Thread 2: Dispatch queue: com.apple.libdispatch-manager 0 libSystem.B.dylib 0x00007fff817f612a kevent + 10 1 libSystem.B.dylib 0x00007fff817f7ffd _dispatch_mgr_invoke + 154 2 libSystem.B.dylib 0x00007fff817f7cd4 _dispatch_queue_invoke + 185 3 libSystem.B.dylib 0x00007fff817f77fe _dispatch_worker_thread2 + 252 4 libSystem.B.dylib 0x00007fff817f7128 _pthread_wqthread + 353 5 libSystem.B.dylib 0x00007fff817f6fc5 start_wqthread + 13 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x00000001030f72f8 rbx: 0x0000000000000000 rcx: 0x0000000000000000 rdx: 0x00000001030f72c0 rdi: 0x0000000103411d70 rsi: 0x00007fff835dd6e0 rbp: 0x00007fff5fbfde70 rsp: 0x00007fff5fbfde18 r8: 0x00000001034e000e r9: 0x0000000000000000 r10: 0x0000000103253dc0 r11: 0x000101d8c9f01699 r12: 0x0000000000000000 r13: 0x0000000103442ca0 r14: 0x0000000000000009 r15: 0x0000000000000000 rip: 0x00007fff807be13e rfl: 0x0000000000010246 cr2: 0x0000000086ee2000 Binary Images: 0x100000000 - 0x100000fff +org.python.python 2.7.1 (2.7.1) <9FD4D128-BF5C-532C-5D86-D6CFCCBC9B4B> /Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python 0x100003000 - 0x10016bfff +org.python.python 2.7.1, (c) 2004-2008 Python Software Foundation. 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(???) <A2468032-4479-3CAA-1A69-BCDDB175FA5B> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/cStringIO.so 0x1006b4000 - 0x1006e8fef +pyexpat.so ??? (???) <2C6C6018-282A-7246-BD56-3691EFA70040> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/pyexpat.so 0x1007ba000 - 0x1007bbff7 +_functools.so ??? (???) <1FED0B3E-9EF4-7F5F-BEEF-7A871C91742C> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_functools.so 0x101200000 - 0x101205fef +math.so ??? (???) <5C610DB7-8D9B-A209-18B3-C3E47ED8ADAC> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/math.so 0x10120c000 - 0x10120dfff +_hashlib.so ??? (???) <3023BD83-037A-8F21-41C6-0A4709A61A97> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_hashlib.so 0x101211000 - 0x101212fff +_random.so ??? (???) <6992947E-5956-1B59-D8B8-91BA42722ADC> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_random.so 0x101215000 - 0x101216ff7 +fcntl.so ??? (???) <810DE937-99C9-04F3-EAE9-E4F6F910AE12> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/fcntl.so 0x101259000 - 0x101259fff +grp.so ??? (???) <7E805F5C-690E-AC8B-0434-EF9CC748A5AA> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/grp.so 0x10125c000 - 0x10125ffff +select.so ??? (???) <E0128859-3D71-4B22-0C3F-2B2108B64825> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/select.so 0x101265000 - 0x101269fff +_struct.so ??? (???) <142F715D-36B2-71BC-850B-814AA3B26E45> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_struct.so 0x101270000 - 0x10127dff7 +_curses.so ??? 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(???) <6752D7D7-760E-00A9-244B-6641A95F6A87> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_locale.so 0x10140c000 - 0x10141bff7 +cPickle.so ??? (???) <1037828C-23CF-3BA3-42DA-B0589942FBD6> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/cPickle.so 0x101423000 - 0x101425ff7 +_lsprof.so ??? (???) <2764A876-CE4B-1033-11D7-483606CFCCF2> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_lsprof.so 0x1014a9000 - 0x1014b0fff +_socket.so ??? (???) <C281399D-A359-A5A0-0691-18F68FB57A5F> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_socket.so 0x1014ba000 - 0x1014beff7 +_ssl.so ??? (???) <25ED963C-2330-4B25-160F-D36D19985CB2> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_ssl.so 0x101582000 - 0x1015cdff7 +umath.so ??? (???) <D43CFAA8-0AB3-21E1-8209-8ADD82EF0DE2> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/umath.so 0x1015f7000 - 0x1015fbfff +_dotblas.so ??? (???) <83217C6D-C314-3191-3BFF-BA9284630548> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/_dotblas.so 0x101700000 - 0x1017fffff +multiarray.so ??? (???) <7CE2F23D-13C5-3CEA-DD69-3C6CDC81E11D> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/multiarray.so 0x101892000 - 0x1018abfff +_sort.so ??? (???) <786A91A9-A8D3-DAFD-CC2F-229DF623C3C6> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/_sort.so 0x1018f4000 - 0x10191bfff +scalarmath.so ??? (???) <78336B61-F517-50A8-0B9F-5FE6D5B41955> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/scalarmath.so 0x10196c000 - 0x101970fff +_compiled_base.so ??? 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(???) <9BAEB2F2-B485-6349-E1AB-637FE12EE770> /usr/lib/libSystem.B.dylib ----------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------- Process: Python [1603] Path: /Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python Identifier: org.python.python Version: 2.7.1 (2.7.1) Code Type: X86-64 (Native) Parent Process: bash [900] Date/Time: 2011-05-13 15:58:23.219 +0200 OS Version: Mac OS X 10.6.7 (10J869) Report Version: 6 Exception Type: EXC_BAD_ACCESS (SIGSEGV) Exception Codes: KERN_INVALID_ADDRESS at 0x0000000000000010 Crashed Thread: 0 Dispatch queue: com.apple.main-thread Application Specific Information: objc_msgSend() selector name: _propagateDirtyRectsToOpaqueAncestors Thread 0 Crashed: Dispatch queue: com.apple.main-thread 0 libobjc.A.dylib 0x00007fff807be11c objc_msgSend + 40 1 com.apple.CoreFoundation 0x00007fff86ec8d4e CFArrayApplyFunction + 222 2 com.apple.AppKit 0x00007fff83485c55 -[NSView _propagateDirtyRectsToOpaqueAncestors] + 168 3 com.apple.AppKit 0x00007fff82eef934 -[NSView displayIfNeeded] + 355 4 com.apple.AppKit 0x00007fff82eeaa46 _handleWindowNeedsDisplay + 678 5 com.apple.CoreFoundation 0x00007fff86f0db37 __CFRunLoopDoObservers + 519 6 com.apple.CoreFoundation 0x00007fff86ee9464 __CFRunLoopRun + 468 7 com.apple.CoreFoundation 0x00007fff86ee8dbf CFRunLoopRunSpecific + 575 8 com.apple.HIToolbox 0x00007fff87fe97ee RunCurrentEventLoopInMode + 333 9 com.apple.HIToolbox 0x00007fff87fe9551 ReceiveNextEventCommon + 148 10 com.apple.HIToolbox 0x00007fff87fe94ac BlockUntilNextEventMatchingListInMode + 59 11 com.apple.AppKit 0x00007fff82ebfe64 _DPSNextEvent + 718 12 com.apple.AppKit 0x00007fff82ebf7a9 -[NSApplication nextEventMatchingMask:untilDate:inMode:dequeue:] + 155 13 _macosx.so 0x00000001029cff22 wait_for_stdin + 514 14 readline.so 0x00000001012cffc5 call_readline + 309 15 org.python.python 0x0000000100008ee2 PyOS_Readline + 274 16 org.python.python 0x00000001000b6a95 builtin_raw_input + 597 17 org.python.python 0x00000001000c124d PyEval_EvalFrameEx + 22397 18 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 19 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 20 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 21 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 22 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 23 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 24 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 25 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 26 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 27 org.python.python 0x00000001000c0d8a PyEval_EvalFrameEx + 21178 28 org.python.python 0x00000001000c2f49 PyEval_EvalCodeEx + 2137 29 org.python.python 0x00000001000c3066 PyEval_EvalCode + 54 30 org.python.python 0x00000001000e7b2e PyRun_FileExFlags + 174 31 org.python.python 0x00000001000e7de9 PyRun_SimpleFileExFlags + 489 32 org.python.python 0x00000001000fe75c Py_Main + 2940 33 org.python.python 0x0000000100000f14 0x100000000 + 3860 Thread 1: com.apple.CFSocket.private 0 libSystem.B.dylib 0x00007fff81820e52 select$DARWIN_EXTSN + 10 1 com.apple.CoreFoundation 0x00007fff86f0b498 __CFSocketManager + 824 2 libSystem.B.dylib 0x00007fff818164f6 _pthread_start + 331 3 libSystem.B.dylib 0x00007fff818163a9 thread_start + 13 Thread 2: Dispatch queue: com.apple.libdispatch-manager 0 libSystem.B.dylib 0x00007fff817f612a kevent + 10 1 libSystem.B.dylib 0x00007fff817f7ffd _dispatch_mgr_invoke + 154 2 libSystem.B.dylib 0x00007fff817f7cd4 _dispatch_queue_invoke + 185 3 libSystem.B.dylib 0x00007fff817f77fe _dispatch_worker_thread2 + 252 4 libSystem.B.dylib 0x00007fff817f7128 _pthread_wqthread + 353 5 libSystem.B.dylib 0x00007fff817f6fc5 start_wqthread + 13 Thread 3: 0 libSystem.B.dylib 0x00007fff817dd29a mach_msg_trap + 10 1 libSystem.B.dylib 0x00007fff817dd90d mach_msg + 59 2 com.apple.CoreFoundation 0x00007fff86ee9932 __CFRunLoopRun + 1698 3 com.apple.CoreFoundation 0x00007fff86ee8dbf CFRunLoopRunSpecific + 575 4 com.apple.CoreFoundation 0x00007fff86ee8b46 CFRunLoopRun + 70 5 com.apple.DesktopServices 0x00007fff862c34d2 TSystemNotificationTask::SystemNotificationTaskProc(void*) + 514 6 ...ple.CoreServices.CarbonCore 0x00007fff83def335 PrivateMPEntryPoint + 63 7 libSystem.B.dylib 0x00007fff818164f6 _pthread_start + 331 8 libSystem.B.dylib 0x00007fff818163a9 thread_start + 13 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x000000010d823470 rbx: 0x0000000000000018 rcx: 0x0000000000000086 rdx: 0x000000010d823430 rdi: 0x0000000152a36ee0 rsi: 0x00007fff835eb47f rbp: 0x00007fff5fbfcb40 rsp: 0x00007fff5fbfcae8 r8: 0x0000000000000001 r9: 0x0000000139de2a40 r10: 0x00007fff86ec6f40 r11: 0x0000000000000000 r12: 0x0000000000000003 r13: 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