There's a new version of jode, version 1.1.1, which fixes most bugs reported since the 1.1 version.
Currently I'm working on a jode 2.0. It features an ANT based build process, the package name has changed to net.sf.jode, and there is a well documented bytecode interface that you may use for other purposes. For sneak preview checkout the CVS repository or have a look at the api at http://jode.sf.net/api/ . I will make a beta release jode-1.90 once I get everything running again.