From: <ha...@us...> - 2012-08-30 11:47:20
|
Revision: 17490 http://jmol.svn.sourceforge.net/jmol/?rev=17490&view=rev Author: hansonr Date: 2012-08-30 11:47:10 +0000 (Thu, 30 Aug 2012) Log Message: ----------- ___version=13.0.2_dev bug fix: PDB polymers of length 1 allow size to be set and appear {visible} but are not Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-08-30 11:46:52 UTC (rev 17489) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-08-30 11:47:10 UTC (rev 17490) @@ -11,7 +11,7 @@ ___version=13.0.2_dev -bug fix: PDB polymers of length 1 allow mad to be set and appear {visible} but are not +bug fix: PDB polymers of length 1 allow size to be set and appear {visible} but are not bug fix: OPEN dialog doesn't allow for no PDB cartoons. bug fix: open dialog for 1-residue PDB files does not show atoms. bug fix: pngj storage of Spartan directory zip files or Spartan directories cannot be read This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2012-09-05 08:34:37
|
Revision: 17513 http://jmol.svn.sourceforge.net/jmol/?rev=17513&view=rev Author: nicove Date: 2012-09-05 08:34:26 +0000 (Wed, 05 Sep 2012) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-04 15:34:22 UTC (rev 17512) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-05 08:34:26 UTC (rev 17513) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.2 +___version=13.0.3_dev + +============================================================================= +version=13.0.2 + bug fix: translate x 0 does not recenter the model in the window bug fix: PDB polymers of length 1 allow size to be set and appear {visible} but are not bug fix: OPEN dialog doesn't allow for no PDB cartoons. This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2012-09-08 16:06:35
|
Revision: 17529 http://jmol.svn.sourceforge.net/jmol/?rev=17529&view=rev Author: hansonr Date: 2012-09-08 16:06:29 +0000 (Sat, 08 Sep 2012) Log Message: ----------- ___version=13.0.4_HOLD TODO -- JUNIT monster test failure Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-08 16:05:56 UTC (rev 17528) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-08 16:06:29 UTC (rev 17529) @@ -9,8 +9,13 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.4 +___version=13.0.4_HOLD + +TODO -- JUNIT monster test failure + + + bug fix: ISOSURFACE saving in state broken 7/30/12 in 13.0.RC3 bug fix: simple isosurface PLANE not saved in state bug fix: isosurface command with MAP from state when saved to state may fail This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2012-09-08 22:32:59
|
Revision: 17538 http://jmol.svn.sourceforge.net/jmol/?rev=17538&view=rev Author: hansonr Date: 2012-09-08 22:32:53 +0000 (Sat, 08 Sep 2012) Log Message: ----------- ___version=13.0.4 bug fix: translate selected x ... bug Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-08 22:32:04 UTC (rev 17537) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-08 22:32:53 UTC (rev 17538) @@ -11,6 +11,7 @@ ___version=13.0.4 +bug fix: translate selected x ... bug bug fix: ISOSURFACE saving in state broken 7/30/12 in 13.0.RC3 bug fix: simple isosurface PLANE not saved in state bug fix: isosurface command with MAP from state when saved to state may fail This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2012-09-10 19:49:42
|
Revision: 17549 http://jmol.svn.sourceforge.net/jmol/?rev=17549&view=rev Author: nicove Date: 2012-09-10 19:49:36 +0000 (Mon, 10 Sep 2012) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-10 18:47:18 UTC (rev 17548) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-09-10 19:49:36 UTC (rev 17549) @@ -9,13 +9,19 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.4 +___version=13.0.5_dev +============================================================================= + +version=13.0.4 + bug fix: translate selected x ... bug bug fix: ISOSURFACE saving in state broken 7/30/12 in 13.0.RC3 bug fix: simple isosurface PLANE not saved in state bug fix: isosurface command with MAP from state when saved to state may fail +============================================================================= + version=13.0.3 bug fix: CUBE reader reading atom Z numbers as partial charge This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2012-10-02 21:25:13
|
Revision: 17613 http://jmol.svn.sourceforge.net/jmol/?rev=17613&view=rev Author: hansonr Date: 2012-10-02 21:25:07 +0000 (Tue, 02 Oct 2012) Log Message: ----------- Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-02 18:51:23 UTC (rev 17612) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-02 21:25:07 UTC (rev 17613) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.5_dev +___version=13.0.6 +bug fix: PDB 4B2Q, with faulty (incomplete) REMARK 350 not read + +version=13.0.5 + bug fix: CASTEP PHONON files not loading ============================================================================= This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2012-10-03 19:20:22
|
Revision: 17617 http://jmol.svn.sourceforge.net/jmol/?rev=17617&view=rev Author: nicove Date: 2012-10-03 19:20:15 +0000 (Wed, 03 Oct 2012) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-03 11:56:17 UTC (rev 17616) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-03 19:20:15 UTC (rev 17617) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.6 +___version=13.0.7_dev +============================================================================= + +version=13.0.6 + bug fix: PDB 4B2Q, with faulty (incomplete) REMARK 350 not read version=13.0.5 This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2012-10-28 03:25:03
|
Revision: 17689 http://jmol.svn.sourceforge.net/jmol/?rev=17689&view=rev Author: hansonr Date: 2012-10-28 03:24:57 +0000 (Sun, 28 Oct 2012) Log Message: ----------- ___version=13.0.8 FOR RELEASE code: clearing font cache upon zap. bug fix: boundbox $pmeshID, center $pmeshID, and zoomto $pmeshID not implemented bug fix: try/catch not working when embedded in another context bug fix: JmolData not producing output for PRINT commands bug fix: JmolData setting haveDisplay true, then failing to get mouse manager bug fix: MRC file reader not setting default cutoff correctly bug fix: MRC surface file reader with symmetry error Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-28 03:24:04 UTC (rev 17688) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-28 03:24:57 UTC (rev 17689) @@ -19,7 +19,7 @@ bug fix: MRC file reader not setting default cutoff correctly bug fix: MRC surface file reader with symmetry error -___version=13.0.7 +version=13.0.7 bug fix: set multipleBondSpacing 0.35 not compatible with P=O, S=O or O=C=O bug fix: export may be missing protein cartoon turn This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2012-10-28 06:48:18
|
Revision: 17692 http://jmol.svn.sourceforge.net/jmol/?rev=17692&view=rev Author: nicove Date: 2012-10-28 06:48:11 +0000 (Sun, 28 Oct 2012) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-28 06:26:37 UTC (rev 17691) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-10-28 06:48:11 UTC (rev 17692) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.8 +___version=13.0.9_dev +============================================================================= + +version=13.0.8 + code: clearing font cache upon zap. bug fix: boundbox $pmeshID, center $pmeshID, and zoomto $pmeshID not implemented bug fix: try/catch not working when embedded in another context @@ -19,6 +23,8 @@ bug fix: MRC file reader not setting default cutoff correctly bug fix: MRC surface file reader with symmetry error +============================================================================= + version=13.0.7 bug fix: set multipleBondSpacing 0.35 not compatible with P=O, S=O or O=C=O This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2012-11-23 12:17:54
|
Revision: 17749 http://jmol.svn.sourceforge.net/jmol/?rev=17749&view=rev Author: hansonr Date: 2012-11-23 12:17:47 +0000 (Fri, 23 Nov 2012) Log Message: ----------- FOR RELEASE ___version=13.0.9 bug fix: Jmol application toolbar picking tool should not select none bug fix: ellipsoid rendering does not allow axes less than 0.2 Angstroms (changed to 0.02) bug fix: CASTEP density reader fails to reset origin to 0 0 0 in mapping bug fix: UTF files with BOM (byte order marker) present not read correctly bug fix: UTF files within GZIP or ZIP files not read correctly bug fix: set picking draw no longer works in Jmol 13.0 or 13.1 bug fix: select resno=@{n+3} fails in 12.2, 13.0, and 13.1 Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-11-23 12:16:00 UTC (rev 17748) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-11-23 12:17:47 UTC (rev 17749) @@ -9,7 +9,7 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.9_dev +___version=13.0.9 bug fix: Jmol application toolbar picking tool should not select none bug fix: ellipsoid rendering does not allow axes less than 0.2 Angstroms (changed to 0.02) This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2012-11-23 13:13:39
|
Revision: 17751 http://jmol.svn.sourceforge.net/jmol/?rev=17751&view=rev Author: nicove Date: 2012-11-23 13:13:28 +0000 (Fri, 23 Nov 2012) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-11-23 12:55:20 UTC (rev 17750) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-11-23 13:13:28 UTC (rev 17751) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.9 +___version=13.0.10_dev +============================================================================= + +version=13.0.9 + bug fix: Jmol application toolbar picking tool should not select none bug fix: ellipsoid rendering does not allow axes less than 0.2 Angstroms (changed to 0.02) bug fix: CASTEP density reader fails to reset origin to 0 0 0 in mapping This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2012-12-08 13:54:46
|
Revision: 17794 http://jmol.svn.sourceforge.net/jmol/?rev=17794&view=rev Author: hansonr Date: 2012-12-08 13:54:39 +0000 (Sat, 08 Dec 2012) Log Message: ----------- for release ___version=13.0.10 bug fix: PDB occupancies for first atoms may be 0.0 instead of 1.0 bug fix: select *W does not work bug fix: !quit was not stopping animation and vibration bug fix: 13.0.9 breaks Gaussian reader, MagRes reader, NAME= load option broken in applet due to ref to jspecview.util.TextFormat bug fix: setEllipsoid... options not implemented for nonthermal ellipsoids in 13.0 or 13.1 Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-12-08 13:52:46 UTC (rev 17793) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-12-08 13:54:39 UTC (rev 17794) @@ -9,7 +9,7 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.10_dev +___version=13.0.10 bug fix: PDB occupancies for first atoms may be 0.0 instead of 1.0 bug fix: select *W does not work This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2012-12-08 19:02:10
|
Revision: 17800 http://jmol.svn.sourceforge.net/jmol/?rev=17800&view=rev Author: nicove Date: 2012-12-08 19:02:03 +0000 (Sat, 08 Dec 2012) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-12-08 18:09:44 UTC (rev 17799) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2012-12-08 19:02:03 UTC (rev 17800) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.10 +___version=13.0.11_dev +============================================================================= + +version=13.0.10 + bug fix: PDB occupancies for first atoms may be 0.0 instead of 1.0 bug fix: select *W does not work bug fix: !quit was not stopping animation and vibration This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-01-18 00:36:12
|
Revision: 17869 http://jmol.svn.sourceforge.net/jmol/?rev=17869&view=rev Author: hansonr Date: 2013-01-18 00:36:05 +0000 (Fri, 18 Jan 2013) Log Message: ----------- Jmol 13.0.12 and 13.1.12 are ready for release Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-01-18 00:33:53 UTC (rev 17868) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-01-18 00:36:05 UTC (rev 17869) @@ -9,8 +9,10 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.11 +___version=13.0.12 +version=13.0.11 + bug fix: MOPAC2012 files not recognized code: Naga sockets upgrade to Naga-3_0. (MolecularPlayground and jsonKiosk) This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2013-01-25 08:00:34
|
Revision: 17881 http://jmol.svn.sourceforge.net/jmol/?rev=17881&view=rev Author: nicove Date: 2013-01-25 08:00:22 +0000 (Fri, 25 Jan 2013) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-01-24 22:57:47 UTC (rev 17880) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-01-25 08:00:22 UTC (rev 17881) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.12 +___version=13.0.13_dev +============================================================================= + +version=13.0.12 + bug fix: PDB file reading of remediated 1A7Y and 1E9W error due to too many CONECT bonds -- now reads HEADER columns 63-66 for 4-digit PDB ID. -- only if this ID is absent will the number of CONECT bonds be checked in decision to autobond This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-02-18 18:52:28
|
Revision: 17936 http://jmol.svn.sourceforge.net/jmol/?rev=17936&view=rev Author: hansonr Date: 2013-02-18 18:52:21 +0000 (Mon, 18 Feb 2013) Log Message: ----------- version 13.0.13 -- for release ___version=13.0.13 bug fix: MOPAC reader not reading recent MOPAC files bug fix: set ellipsoid FILL does not exclude bonds leading into the empty quadrant bug fix: set picking IDENT when picking is already ident can cancel a pending measurement bug fix: applet does not refresh when mouse exits with pending measurement bug fix: signed applet file open dialog does not work bug fix: labels within fog should be hidden bug fix: load CENTROID does not always work -- wrong implicit normalization flag (was -1 instead of 1) bug fix: The "show history" command is supposed to clear out the "show history" command itself, but only if it is a top-level command (from the console), but it does more than that if it is part of script("show history"). Probably true with all recent versions of Jmol. Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-02-18 18:51:03 UTC (rev 17935) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-02-18 18:52:21 UTC (rev 17936) @@ -9,7 +9,7 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.13_dev +___version=13.0.13 bug fix: MOPAC reader not reading recent MOPAC files bug fix: set ellipsoid FILL does not exclude bonds leading into the empty quadrant This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-02-22 00:15:34
|
Revision: 17943 http://jmol.svn.sourceforge.net/jmol/?rev=17943&view=rev Author: hansonr Date: 2013-02-22 00:15:18 +0000 (Fri, 22 Feb 2013) Log Message: ----------- ___version=13.0.13 bug fix: MOPAC reader not reading recent MOPAC files bug fix: set ellipsoid FILL does not exclude bonds leading into the empty quadrant bug fix: set picking IDENT when picking is already ident can cancel a pending measurement bug fix: applet does not refresh when mouse exits with pending measurement bug fix: signed applet file open dialog does not work bug fix: labels within fog should be hidden bug fix: load CENTROID does not always work -- wrong implicit normalization flag (was -1 instead of 1) bug fix: The "show history" command is supposed to clear out the "show history" command itself, but only if it is a top-level command (from the console), but it does more than that if it is part of script("show history"). Probably true with all recent versions of Jmol. Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-02-22 00:00:20 UTC (rev 17942) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-02-22 00:15:18 UTC (rev 17943) @@ -9,6 +9,10 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. +___version=13.1.14_dev + +============================================================================= + ___version=13.0.13 bug fix: MOPAC reader not reading recent MOPAC files This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-02-22 00:15:59
|
Revision: 17944 http://jmol.svn.sourceforge.net/jmol/?rev=17944&view=rev Author: hansonr Date: 2013-02-22 00:15:50 +0000 (Fri, 22 Feb 2013) Log Message: ----------- ___version=13.0.14_dev Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-02-22 00:15:18 UTC (rev 17943) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-02-22 00:15:50 UTC (rev 17944) @@ -9,7 +9,7 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.1.14_dev +___version=13.0.14_dev ============================================================================= This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-03-31 21:26:53
|
Revision: 18029 http://sourceforge.net/p/jmol/code/18029 Author: hansonr Date: 2013-03-31 21:26:49 +0000 (Sun, 31 Mar 2013) Log Message: ----------- for release ___version=13.0.14 bug fix: MOL2 reader not properly assigning element symbols bug fix: isosurface slab translucent broken when saved in state bug fix: isosurface slab translucent mesh broken when saved in state bug fix: sync socket connections not working bug fix: WRITE PNGJ does not allow sizing of image bug fix: backbone/spine defs do not take into account phosphorylated proteins. Better: "@backbone protein&(_a>=1&_a<6|_a>=64&_a<72)|nucleic&(_a>=6&_a<14|_a>=72)", "@spine protein&_a>=1&_a<4|nucleic&_a>=6&_a<14&_a!=12", bug fix: getProperty fileInfo fixed and documented bug fix: assign atom does not update selections for elements bug fix: LcaoCartoon "-sp3d" not working bug fix: incorrect calculation of RMSD for COMPARE and SMILES bug fix: ModelKit menu "SHIFT to rotate" should read "ALT to rotate" Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-03-31 21:26:01 UTC (rev 18028) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-03-31 21:26:49 UTC (rev 18029) @@ -9,18 +9,16 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.14_dev31 +___version=13.0.14 bug fix: MOL2 reader not properly assigning element symbols bug fix: isosurface slab translucent broken when saved in state bug fix: isosurface slab translucent mesh broken when saved in state - bug fix: sync socket connections not working bug fix: WRITE PNGJ does not allow sizing of image bug fix: backbone/spine defs do not take into account phosphorylated proteins. Better: "@backbone protein&(_a>=1&_a<6|_a>=64&_a<72)|nucleic&(_a>=6&_a<14|_a>=72)", "@spine protein&_a>=1&_a<4|nucleic&_a>=6&_a<14&_a!=12", - bug fix: getProperty fileInfo fixed and documented bug fix: assign atom does not update selections for elements bug fix: LcaoCartoon "-sp3d" not working This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-03-31 22:36:09
|
Revision: 18035 http://sourceforge.net/p/jmol/code/18035 Author: hansonr Date: 2013-03-31 22:36:06 +0000 (Sun, 31 Mar 2013) Log Message: ----------- jvxl reader broken Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-03-31 22:34:11 UTC (rev 18034) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-03-31 22:36:06 UTC (rev 18035) @@ -9,7 +9,7 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.14 +___version=13.0.14_hold bug fix: MOL2 reader not properly assigning element symbols bug fix: isosurface slab translucent broken when saved in state This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2013-04-01 09:26:03
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Revision: 18048 http://sourceforge.net/p/jmol/code/18048 Author: nicove Date: 2013-04-01 09:26:00 +0000 (Mon, 01 Apr 2013) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-01 09:24:17 UTC (rev 18047) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-01 09:26:00 UTC (rev 18048) @@ -30,7 +30,7 @@ ============================================================================= -___version=13.0.13 +version=13.0.13 bug fix: MOPAC reader not reading recent MOPAC files bug fix: set ellipsoid FILL does not exclude bonds leading into the empty quadrant This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2013-04-01 09:37:48
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Revision: 18050 http://sourceforge.net/p/jmol/code/18050 Author: nicove Date: 2013-04-01 09:37:43 +0000 (Mon, 01 Apr 2013) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-01 09:26:58 UTC (rev 18049) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-01 09:37:43 UTC (rev 18050) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.14 +___version=13.0.15_dev +============================================================================= + +version=13.0.14 + bug fix: isourface boundbox plane .... bug fix: isosurface boundbox {pt1} {pt2} plane ... bug fix: JVXL 1.0 format reading broken This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-04-28 16:50:02
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Revision: 18179 http://sourceforge.net/p/jmol/code/18179 Author: hansonr Date: 2013-04-28 16:49:59 +0000 (Sun, 28 Apr 2013) Log Message: ----------- ___version=13.0.15 bug fix: isosurface map property may not reference correct atom bug fix: set isosurfacekey may not work with slabbing bug fix: deleting atoms does not remove bioshape rendering bug fix: isosurface in multi-model context saved in state with wrong model number bug fix: labels lost upon z-shading bug fix: {xxx}.cartoon = {xxx}.temperature.all fails to use correct values (also backbone, trace, etc.) bug fix: isosurface translucent level not re-zeroed properly bug fix: command f.sort() and f.reverse() fail. bug fix: select dots > 0 does not work Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-28 16:49:15 UTC (rev 18178) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-28 16:49:59 UTC (rev 18179) @@ -9,7 +9,7 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.15_dev_2013.04.23 +___version=13.0.15 bug fix: isosurface map property may not reference correct atom bug fix: set isosurfacekey may not work with slabbing This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ni...@us...> - 2013-04-28 20:35:10
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Revision: 18184 http://sourceforge.net/p/jmol/code/18184 Author: nicove Date: 2013-04-28 20:35:07 +0000 (Sun, 28 Apr 2013) Log Message: ----------- Version Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-28 19:40:34 UTC (rev 18183) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-04-28 20:35:07 UTC (rev 18184) @@ -9,8 +9,12 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.15 +___version=13.0.16_dev +============================================================================= + +version=13.0.15 + bug fix: isosurface map property may not reference correct atom bug fix: set isosurfacekey may not work with slabbing bug fix: deleting atoms does not remove bioshape rendering This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <ha...@us...> - 2013-06-06 03:12:17
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Revision: 18285 http://sourceforge.net/p/jmol/code/18285 Author: hansonr Date: 2013-06-06 03:12:13 +0000 (Thu, 06 Jun 2013) Log Message: ----------- Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-06-06 03:11:07 UTC (rev 18284) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-06-06 03:12:13 UTC (rev 18285) @@ -9,7 +9,7 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.16_dev_2013.06.04 +___version=13.0.16_dev_2013.06.05 bug fix: antialiasing or resizing stray lines problem solved (introduced in 11.0, 08/2006!) bug fix: "display add" by itself should not do anything This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |