On Wed, Apr 28, 2010 at 5:34 PM, LANCASHIRE,Robert J <robert.lancashire@uwimona.edu.jm> wrote:
Bob,

this would then mean Jmol really does provide a replacement for MDL CHIME.....
Would Jmol then read mol files where all the z coords were zero and be able
to generate a reasonable representation?


Yes, you can now use:

load "myfile.mol" filter "2D"

Since you might be interested in that, I've added to the MOL file reader the reading of stereochemical bonds.


Bob

--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900