ps, there is no need to change the file --

script localpath "http://www.proteopedia.org/cgi-bin" "http://www.proteopedia.org/wiki/scripts/Amantadine/Amantadine/1.spt"

does the conversion.


On Sat, Apr 7, 2012 at 12:42 PM, Eric Martz <emartz@microbio.umass.edu> wrote:
Dear Bob,

This Proteopedia (modified) state script
http://www.proteopedia.org/wiki/scripts/Amantadine/Amantadine/1.spt

works in Jmol 11.8.24 and 12.0.31, but NOT in 12.2.16, 12.2.19, or
the 12.2.19_dev currently in Proteopedia.

It is supposed to produce amantadine drug in ball and stick. In
12.2.19_dev only the balls show.
When I run it in application 12.2.19, only the balls show and also
some other sticks show that are not supposed to show.

You can test it this way:

1. Copy the script and comment out this:

  if (loadedfileprev != "550f61a012bca41802f7e3969b23fd54");
    load
/*file*/"/cgi-bin/getfrozenstructure?550f61a012bca41802f7e3969b23fd54";
    loadedfileprev = "550f61a012bca41802f7e3969b23fd54";
    reloadfile = true;
  endif;

2. Run Jmol application and load =2kqt

3. Paste the script (with the load block commented out) into the script console

Thanks, -Eric


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If nature does not answer first what we want,
it is better to take what answer we get.

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