#520 wrong color assigment using cartoon

open
Bob Hanson
Applet (71)
5
2012-01-07
2012-01-07
Anonymous
No

if you see the attached pic, you will see that ILE188 is blue using wireframe and yellow using cartoons.

I use this code

script = 'load 1BRV021_b.pdb;'
+'set hoverDelay 0.1; hover %n %r;'
+'select all;'
+'spacefill off;wireframe on;cartoons on;'
+'set propertyColorScheme "rwb"; color property relativeTemperature range -1 1; set antialiasDisplay true;'
+'select 0,172,173,175,176,182,186,187;color yellow;'
+'select all;'
+'save STATE state_1;'

jmolApplet(["600","600"],script)

I have tried with others proteins and I observed the same pattern, using cartoons the color of the last residue is the same of the last-1 residue.

I am using the last stable veersion (12.2)

Discussion


  • Anonymous
    2012-01-07

     
    Attachments
  • Bob Hanson
    Bob Hanson
    2012-01-08

    Ok this is specifically with proteins that have no structure at there c terminus. Fixed for next version. No access today to web for upload.