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#391 Error reading jmol generated jvxl file with load

closed-fixed
nobody
None
5
2007-06-03
2007-03-26
Rene Kanters
No

Hi,

In my ongoing messing around with JVXL files, I need some grids that are quite big. When I load the cube file to generate the isosurface and write the jvxl file (besides some memory issues as reported in the previous bug report), I now realize that I can not read the files as expected.

If I load the attached jvxl file, I get an error message, while the isosurface comment does deal with it properly.
I had planned to combine a bunch of jvxl files into a single one, so I could turn each of the surfaces on and off as needed after doing a load.

I initially started doing the loading (using the load command) of multiple jvxl surfaces in a single file without a problem, but the grid was less than 100 points wide (which I suspect has something to do with it).

Thanks.
René

PS Here is my output from the console:
$ load H_1s_p.jvxl
script ERROR: Error reading file at line 5:
180 0 0.502793 0
String index out of range: -14
for file /Users/rkanters/Documents/CMoR/www src/AOhyb src/Java/orbitals_jvxl/H_1s_p.jvxl
type mol
----
load >> "H_1s_p.jvxl" <<
$ isosurface "H_1s_p.jvxl"
isosurface1 created; number of isosurfaces = 1
Script completed
$

Discussion

  • Rene Kanters
    Rene Kanters
    2007-03-26

    a jvxl file as created from

     
    Attachments
  • Bob Hanson
    Bob Hanson
    2007-06-03

    Logged In: YES
    user_id=1082841
    Originator: NO

    this file reads fine in 11.1.46. There was a brief period where some development versions of Jmol were creating bad JVXL files. This I think is fixed.

     
  • Bob Hanson
    Bob Hanson
    2007-06-03

    • status: open --> closed-fixed