Just Launched: You can now import projects and releases from Google Code onto SourceForge
We are excited to release new functionality to enable a 1-click import from Google Code onto the Allura platform on SourceForge. You can import tickets, wikis, source, releases, and more with a few simple steps. Read More
IndelExtractor is a GUI and command-line application written in Perl that generates various molecular sequence alignment masks, including one to make identification and removal of Indels and their surrounding ambiguous alignment quick and simple.
Full screen view showing seq and alignment pane with masks
Aligned Sequences pane on Windows, partial sequences in blue
Aligned Sequence pane on RedHat 8.0
BLAST results page with settings in the preferences