Re: [Gmod-schema] [Gmod-gbrowse] ontology term for ECRs (Evolutionary Conserved Regions) and Gbrowsing ECRs

[E. N. <en...@gm...>]

Hello,
I want to load ECRs (Evolutionary Conserved Regions) data in gmod-chado, but
i can't find a cvterm for ECR. Does that cvterm exists?
Or does it have an alternate name ?
This is how my data look like:
............
scaffold_1      ECR Browser     ECR     9625    9815    72%     .
.       ID=ECR1;Target=chr15:18620225-18620415
...........
Thank you in advance.
etienne

On 11/16/06, Scott Cain <cai...@gm...> wrote:
>
> Hi etienne,
>
> I have no idea; two things to try are asking at the SO mailing list:
> https://lists.sourceforge.net/lists/listinfo/song-devel or if you want
> to start with Chado-specific people, try the schema mailing list:
> https://lists.sourceforge.net/lists/listinfo/gmod-schema
>
> As for gbrowse, it can be configured to browse any feature type that can
> be localized (ie, given a start and an end).
>
> Scott
>
>
> On Thu, 2006-11-16 at 10:56 -0800, The SportComputMan wrote:
> > Hello,
> > I am wondering if there exists an ontology term for ECRs(Evolutionary
> > Conserved regions).
> > Also i would like to know if Gbrowse can be configured to browse that
> type
> > of features.
> > Thank you.
> > etienne
> >
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> --
> ------------------------------------------------------------------------
> Scott Cain, Ph. D.                                   cai...@gm...
> GMOD Coordinator (http://www.gmod.org/)                     216-392-3087
> Cold Spring Harbor Laboratory
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