#1099 Some annots. to GO:0015030 Cajal body need rehousing

UniProt
closed
nobody
None
5
2014-09-30
2013-09-24
Paola Roncaglia
No

Hello,

Based on the recent splitting in GO of 'Cajal body' and 'Gemini of coiled bodies' (or Gems), a few annotations may need to be rehoused from the former to the latter.
Background discussion is here: https://sourceforge.net/p/geneontology/ontology-requests/10379/
Suspect annotations are:

UniProtKB Q9VV74 Smn GO:0015030 PMID:16533947 IDA C Survival motor neuron, isoform A Q9VV74_DROME|Smn|CG16725|Dmel_CG16725 protein taxon:7227 20080207 FlyBase
UniProtKB Q9VV74 Smn GO:0015030 PMID:17595295 IDA C Survival motor neuron, isoform A Q9VV74_DROME|Smn|CG16725|Dmel_CG16725 protein taxon:7227 20100520 FlyBase
UniProtKB Q9VV74 Smn GO:0015030 PMID:18791638 IDA C Survival motor neuron, isoform A Q9VV74_DROME|Smn|CG16725|Dmel_CG16725 protein taxon:7227 20100107 FlyBase
UniProtKB Q9VV74 Smn GO:0015030 PMID:18923150 IDA C Survival motor neuron, isoform A Q9VV74_DROME|Smn|CG16725|Dmel_CG16725 protein taxon:7227 20090409 FlyBase

UniProtKB O35876 Smn1 GO:0015030 PMID:12397076 IDA C Survival motor neuron protein SMN_RAT|Smn1|Smn protein taxon:10116 20050911 RGD

UniProtKB Q16637 SMN1 GO:0015030 PMID:8670859 NAS C Survival motor neuron protein SMN_HUMAN|SMN1|SMN2|SMN|SMNC|SMNT protein taxon:9606 20011002 UniProt
UniProtKB Q16637 SMN1 GO:0015030 PMID:9845364 NAS C Survival motor neuron protein SMN_HUMAN|SMN1|SMN2|SMN|SMNC|SMNT protein taxon:9606 20011002 UniProt

Rachael, could you please remove the current cross-reference (UniProtKB-SubCell = Gem) from GO:0015030 Cajal body and move it to the new term GO:0097504 Gemini of coiled bodies?
I'll email FlyBase and RGD to point them to this issue.

Thanks to all,
Paola

Discussion

  • rach_huntley
    rach_huntley
    2013-09-26

    Subcell2GO mapping and two UniProt annotations have now been updated.

     
    • status: open --> closed