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From: <mc...@us...> - 2007-03-18 13:35:17
|
Revision: 361 http://svn.sourceforge.net/egadss/?rev=361&view=rev Author: mcglen Date: 2007-03-17 19:49:14 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Modified Paths: -------------- trunk/egadss/egadss_dev/build.xml Modified: trunk/egadss/egadss_dev/build.xml =================================================================== --- trunk/egadss/egadss_dev/build.xml 2007-03-18 02:41:00 UTC (rev 360) +++ trunk/egadss/egadss_dev/build.xml 2007-03-18 02:49:14 UTC (rev 361) @@ -2,8 +2,8 @@ <project basedir="./" default="rebuildall" name="egadss_dev"> <!-- These two properties should be set before using script --> -<property name="Tomcat.home" value="/Users/mcglen/Desktop/apache-tomcat-5.5.15"/> -<property name="Axis.home" value="/Users/mcglen/Desktop/axis-1_3"/> +<property name="Tomcat.home" value="C:/Sandbox/apache-tomcat-5.5.15"/> +<property name="Axis.home" value="C:/Sandbox/axis-1_3"/> <property name="src" value="src"/> <property name="test" value="test"/> @@ -33,6 +33,8 @@ <pathelement location="${lib}/saxon8.jar"/> <pathelement location="${lib}/saxon8-xpath.jar"/> <pathelement location="${lib}/saxon8-dom.jar"/> + <pathelement location="${lib}/velocity-1.4.jar"/> + <pathelement location="${lib}/velocity-dep-1.4.jar"/> </path> <path id="axis.classpath"> This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2007-03-18 13:34:56
|
Revision: 360 http://svn.sourceforge.net/egadss/?rev=360&view=rev Author: mcglen Date: 2007-03-17 19:41:00 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Removed Paths: ------------- trunk/egadss/egadss_dev/LICENSE trunk/egadss/egadss_dev/RMIClientResults.xml Deleted: trunk/egadss/egadss_dev/LICENSE =================================================================== --- trunk/egadss/egadss_dev/LICENSE 2007-03-18 02:39:47 UTC (rev 359) +++ trunk/egadss/egadss_dev/LICENSE 2007-03-18 02:41:00 UTC (rev 360) @@ -1,193 +0,0 @@ -The GNU General Public License (GPL) - - -Version 2, June 1991 - - -Copyright (C) 1989, 1991 Free Software Foundation, Inc. -59 Temple Place, Suite 330, Boston, MA 02111-1307 USA - - -Everyone is permitted to copy and distribute verbatim copies -of this license document, but changing it is not allowed. - - -Preamble - - -The licenses for most software are designed to take away your freedom to share and change it. By contrast, the GNU General Public License is intended to guarantee your freedom to share and change free software--to make sure the software is free for all its users. This General Public License applies to most of the Free Software Foundation's software and to any other program whose authors commit to using it. (Some other Free Software Foundation software is covered by the GNU Library General Public License instead.) You can apply it to your programs, too. - - -When we speak of free software, we are referring to freedom, not price. Our General Public Licenses are designed to make sure that you have the freedom to distribute copies of free software (and charge for this service if you wish), that you receive source code or can get it if you want it, that you can change the software or use pieces of it in new free programs; and that you know you can do these things. - - -To protect your rights, we need to make restrictions that forbid anyone to deny you these rights or to ask you to surrender the rights. These restrictions translate to certain responsibilities for you if you distribute copies of the software, or if you modify it. - - -For example, if you distribute copies of such a program, whether gratis or for a fee, you must give the recipients all the rights that you have. You must make sure that they, too, receive or can get the source code. And you must show them these terms so they know their rights. - - -We protect your rights with two steps: (1) copyright the software, and (2) offer you this license which gives you legal permission to copy, distribute and/or modify the software. - - -Also, for each author's protection and ours, we want to make certain that everyone understands that there is no warranty for this free software. If the software is modified by someone else and passed on, we want its recipients to know that what they have is not the original, so that any problems introduced by others will not reflect on the original authors' reputations. - - -Finally, any free program is threatened constantly by software patents. We wish to avoid the danger that redistributors of a free program will individually obtain patent licenses, in effect making the program proprietary. To prevent this, we have made it clear that any patent must be licensed for everyone's free use or not licensed at all. - - -The precise terms and conditions for copying, distribution and modification follow. - - -TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION - - -0. This License applies to any program or other work which contains a notice placed by the copyright holder saying it may be distributed under the terms of this General Public License. The "Program", below, refers to any such program or work, and a "work based on the Program" means either the Program or any derivative work under copyright law: that is to say, a work containing the Program or a portion of it, either verbatim or with modifications and/or translated into another language. (Hereinafter, translation is included without limitation in the term "modification".) Each licensee is addressed as "you". - - -Activities other than copying, distribution and modification are not covered by this License; they are outside its scope. The act of running the Program is not restricted, and the output from the Program is covered only if its contents constitute a work based on the Program (independent of having been made by running the Program). Whether that is true depends on what the Program does. - - -1. You may copy and distribute verbatim copies of the Program's source code as you receive it, in any medium, provided that you conspicuously and appropriately publish on each copy an appropriate copyright notice and disclaimer of warranty; keep intact all the notices that refer to this License and to the absence of any warranty; and give any other recipients of the Program a copy of this License along with the Program. - - -You may charge a fee for the physical act of transferring a copy, and you may at your option offer warranty protection in exchange for a fee. - - -2. You may modify your copy or copies of the Program or any portion of it, thus forming a work based on the Program, and copy and distribute such modifications or work under the terms of Section 1 above, provided that you also meet all of these conditions: - - - -a) You must cause the modified files to carry prominent notices stating that you changed the files and the date of any change. - - -b) You must cause any work that you distribute or publish, that in whole or in part contains or is derived from the Program or any part thereof, to be licensed as a whole at no charge to all third parties under the terms of this License. - - -c) If the modified program normally reads commands interactively when run, you must cause it, when started running for such interactive use in the most ordinary way, to print or display an announcement including an appropriate copyright notice and a notice that there is no warranty (or else, saying that you provide a warranty) and that users may redistribute the program under these conditions, and telling the user how to view a copy of this License. (Exception: if the Program itself is interactive but does not normally print such an announcement, your work based on the Program is not required to print an announcement.) - - -These requirements apply to the modified work as a whole. If identifiable sections of that work are not derived from the Program, and can be reasonably considered independent and separate works in themselves, then this License, and its terms, do not apply to those sections when you distribute them as separate works. But when you distribute the same sections as part of a whole which is a work based on the Program, the distribution of the whole must be on the terms of this License, whose permissions for other licensees extend to the entire whole, and thus to each and every part regardless of who wrote it. - - -Thus, it is not the intent of this section to claim rights or contest your rights to work written entirely by you; rather, the intent is to exercise the right to control the distribution of derivative or collective works based on the Program. - - -In addition, mere aggregation of another work not based on the Program with the Program (or with a work based on the Program) on a volume of a storage or distribution medium does not bring the other work under the scope of this License. - - -3. You may copy and distribute the Program (or a work based on it, under Section 2) in object code or executable form under the terms of Sections 1 and 2 above provided that you also do one of the following: - - - -a) Accompany it with the complete corresponding machine-readable source code, which must be distributed under the terms of Sections 1 and 2 above on a medium customarily used for software interchange; or, - - -b) Accompany it with a written offer, valid for at least three years, to give any third party, for a charge no more than your cost of physically performing source distribution, a complete machine-readable copy of the corresponding source code, to be distributed under the terms of Sections 1 and 2 above on a medium customarily used for software interchange; or, - - -c) Accompany it with the information you received as to the offer to distribute corresponding source code. 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However, parties who have received copies, or rights, from you under this License will not have their licenses terminated so long as such parties remain in full compliance. - - -5. You are not required to accept this License, since you have not signed it. However, nothing else grants you permission to modify or distribute the Program or its derivative works. These actions are prohibited by law if you do not accept this License. Therefore, by modifying or distributing the Program (or any work based on the Program), you indicate your acceptance of this License to do so, and all its terms and conditions for copying, distributing or modifying the Program or works based on it. - - -6. Each time you redistribute the Program (or any work based on the Program), the recipient automatically receives a license from the original licensor to copy, distribute or modify the Program subject to these terms and conditions. You may not impose any further restrictions on the recipients' exercise of the rights granted herein. You are not responsible for enforcing compliance by third parties to this License. - - -7. If, as a consequence of a court judgment or allegation of patent infringement or for any other reason (not limited to patent issues), conditions are imposed on you (whether by court order, agreement or otherwise) that contradict the conditions of this License, they do not excuse you from the conditions of this License. If you cannot distribute so as to satisfy simultaneously your obligations under this License and any other pertinent obligations, then as a consequence you may not distribute the Program at all. For example, if a patent license would not permit royalty-free redistribution of the Program by all those who receive copies directly or indirectly through you, then the only way you could satisfy both it and this License would be to refrain entirely from distribution of the Program. - - -If any portion of this section is held invalid or unenforceable under any particular circumstance, the balance of the section is intended to apply and the section as a whole is intended to apply in other circumstances. - - -It is not the purpose of this section to induce you to infringe any patents or other property right claims or to contest validity of any such claims; this section has the sole purpose of protecting the integrity of the free software distribution system, which is implemented by public license practices. Many people have made generous contributions to the wide range of software distributed through that system in reliance on consistent application of that system; it is up to the author/donor to decide if he or she is willing to distribute software through any other system and a licensee cannot impose that choice. - - -This section is intended to make thoroughly clear what is believed to be a consequence of the rest of this License. - - -8. If the distribution and/or use of the Program is restricted in certain countries either by patents or by copyrighted interfaces, the original copyright holder who places the Program under this License may add an explicit geographical distribution limitation excluding those countries, so that distribution is permitted only in or among countries not thus excluded. In such case, this License incorporates the limitation as if written in the body of this License. - - -9. The Free Software Foundation may publish revised and/or new versions of the General Public License from time to time. Such new versions will be similar in spirit to the present version, but may differ in detail to address new problems or concerns. - - -Each version is given a distinguishing version number. If the Program specifies a version number of this License which applies to it and "any later version", you have the option of following the terms and conditions either of that version or of any later version published by the Free Software Foundation. If the Program does not specify a version number of this License, you may choose any version ever published by the Free Software Foundation. - - -10. If you wish to incorporate parts of the Program into other free programs whose distribution conditions are different, write to the author to ask for permission. For software which is copyrighted by the Free Software Foundation, write to the Free Software Foundation; we sometimes make exceptions for this. Our decision will be guided by the two goals of preserving the free status of all derivatives of our free software and of promoting the sharing and reuse of software generally. - - -NO WARRANTY - - -11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION. - - -12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. - - -END OF TERMS AND CONDITIONS - - -How to Apply These Terms to Your New Programs - - -If you develop a new program, and you want it to be of the greatest possible use to the public, the best way to achieve this is to make it free software which everyone can redistribute and change under these terms. - - -To do so, attach the following notices to the program. It is safest to attach them to the start of each source file to most effectively convey the exclusion of warranty; and each file should have at least the "copyright" line and a pointer to where the full notice is found. - - - -One line to give the program's name and a brief idea of what it does. -Copyright (C) <year> <name of author> - - -This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. - - -This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. - - -You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA - - - -Also add information on how to contact you by electronic and paper mail. - - -If the program is interactive, make it output a short notice like this when it starts in an interactive mode: - - - -Gnomovision version 69, Copyright (C) year name of author Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'. This is free software, and you are welcome to redistribute it under certain conditions; type `show c' for details. - - - -The hypothetical commands `show w' and `show c' should show the appropriate parts of the General Public License. Of course, the commands you use may be called something other than `show w' and `show c'; they could even be mouse-clicks or menu items--whatever suits your program. - - -You should also get your employer (if you work as a programmer) or your school, if any, to sign a "copyright disclaimer" for the program, if necessary. Here is a sample; alter the names: - - - -Yoyodyne, Inc., hereby disclaims all copyright interest in the program `Gnomovision' (which makes passes at compilers) written by James Hacker. - - -signature of Ty Coon, 1 April 1989 -Ty Coon, President of Vice - - - -This General Public License does not permit incorporating your program into proprietary programs. If your program is a subroutine library, you may consider it more useful to permit linking proprietary applications with the library. If this is what you want to do, use the GNU Library General Public License instead of this License. \ No newline at end of file Deleted: trunk/egadss/egadss_dev/RMIClientResults.xml =================================================================== --- trunk/egadss/egadss_dev/RMIClientResults.xml 2007-03-18 02:39:47 UTC (rev 359) +++ trunk/egadss/egadss_dev/RMIClientResults.xml 2007-03-18 02:41:00 UTC (rev 360) @@ -1,241 +0,0 @@ -<?xml version="1.0" encoding="ISO-8859-1" standalone="yes"?> -<ClinicalDocument xmlns="urn:hl7-org:v3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> - <id assigningAuthorityName="EGADSS" extension="02" root="111"/> - <code code="EGADSS_02" codeSystem="222"/> - <effectiveTime value="20050916"/> - <author> - <time value="20040303"/> - <assignedAuthor> - <id/> - <assignedAuthoringDevice> - <code code="222" codeSystem="222" codeSystemVersion="1"/> - </assignedAuthoringDevice> - </assignedAuthor> - </author> - <custodian> - <assignedCustodian> - <representedCustodianOrganization> - <id/> - <name>EGADSS</name> - </representedCustodianOrganization> - </assignedCustodian> - </custodian> - <recordTarget> - <patient> - <id/> - <patientPatient> - <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"/> - <birthTime value="19660505"/> - <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"/> - </patientPatient> - </patient> - </recordTarget> - <component> - <structuredBody> - <component> - <section> - <code code="111" codeSystem="111"/> - <title>Guideline Recommendations</title> - <entry> - <act classCode="ACT" moodCode="EVN"> - <code code="0.1" codeSystem="1.11.111.1"/> - <text>Recommend Tetnus Booster</text> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_domain_expert" codeSystem="1.11.111.1"/> - <assignedPerson> - <name>Morgan Price, MD -pr...@fa...</name> - </assignedPerson> - </assignedAuthor> - </author> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_encoder" codeSystem="1.11.111.1"/> - <assignedPerson> - <name>Glen McCallum -gl...@eg...</name> - </assignedPerson> - </assignedAuthor> - </author> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_encoding_institution" codeSystem="1.11.111.1"/> - <assignedPerson/> - <representedOrganization> - <name>University of British Columbia, Department of Family Practice</name> - </representedOrganization> - </assignedAuthor> - </author> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="last_encoded_modification" codeSystem="333"/> - <effectiveTime value="20050815"/> - </act> - </entryRelationship> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="recommendation" codeSystem="333"/> - <text/> - <priorityCode code="" codeSystem="444"/> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="111" codeSystem="333"/> - <text/> - </act> - </entryRelationship> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="111" codeSystem="333"/> - <text/> - </act> - </entryRelationship> - </act> - </entryRelationship> - </act> - </entry> - </section> - </component> - <component> - <section> - <code code="111" codeSystem="111"/> - <title>Guideline Recommendations</title> - <entry> - <act classCode="ACT" moodCode="EVN"> - <code code="0.1" codeSystem="1.11.111.1"/> - <text>Tetanus Vaccination Schedule in Adults Td</text> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_domain_expert" codeSystem="1.11.111.1"/> - <assignedPerson> - <name>Morgan Price, MD -pr...@fa...</name> - </assignedPerson> - </assignedAuthor> - </author> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_encoder" codeSystem="1.11.111.1"/> - <assignedPerson> - <name>Glen McCallum -gl...@eg...</name> - </assignedPerson> - </assignedAuthor> - </author> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_encoding_institution" codeSystem="1.11.111.1"/> - <assignedPerson/> - <representedOrganization> - <name>University of British Columbia, Department of Family Practice</name> - </representedOrganization> - </assignedAuthor> - </author> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="last_encoded_modification" codeSystem="333"/> - <effectiveTime value="20050815"/> - </act> - </entryRelationship> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="recommendation" codeSystem="333"/> - <text/> - <priorityCode code="" codeSystem="444"/> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="111" codeSystem="333"/> - <text/> - </act> - </entryRelationship> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="111" codeSystem="333"/> - <text/> - </act> - </entryRelationship> - </act> - </entryRelationship> - </act> - </entry> - </section> - </component> - <component> - <section> - <code code="111" codeSystem="111"/> - <title>Guideline Recommendations</title> - <entry> - <act classCode="ACT" moodCode="EVN"> - <code code="0.1" codeSystem="1.11.111.1"/> - <text>Measles Mumps and Rubella MMR BCCDC Code: MMR</text> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_domain_expert" codeSystem="1.11.111.1"/> - <assignedPerson> - <name>Morgan Price, MD -pr...@fa...</name> - </assignedPerson> - </assignedAuthor> - </author> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_encoder" codeSystem="1.11.111.1"/> - <assignedPerson> - <name>Glen McCallum -gl...@eg...</name> - </assignedPerson> - </assignedAuthor> - </author> - <author> - <time value="20000101"/> - <assignedAuthor> - <id extension="1" root="111"/> - <code code="guideline_encoding_institution" codeSystem="1.11.111.1"/> - <assignedPerson/> - <representedOrganization> - <name>University of British Columbia, Department of Family Practice</name> - </representedOrganization> - </assignedAuthor> - </author> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="last_encoded_modification" codeSystem="333"/> - <effectiveTime value="20050815"/> - </act> - </entryRelationship> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="recommendation" codeSystem="333"/> - <text/> - <priorityCode code="" codeSystem="444"/> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="111" codeSystem="333"/> - <text/> - </act> - </entryRelationship> - <entryRelationship typeCode="COMP"> - <act classCode="ACT" moodCode="EVN"> - <code code="111" codeSystem="333"/> - <text/> - </act> - </entryRelationship> - </act> - </entryRelationship> - </act> - </entry> - </section> - </component> - </structuredBody> - </component> -</ClinicalDocument> This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2007-03-18 13:33:53
|
Revision: 363 http://svn.sourceforge.net/egadss/?rev=363&view=rev Author: mcglen Date: 2007-03-17 19:50:08 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Added Paths: ----------- trunk/egadss/egadss_dev/lib/velocity-dep-1.4.jar Added: trunk/egadss/egadss_dev/lib/velocity-dep-1.4.jar =================================================================== (Binary files differ) Property changes on: trunk/egadss/egadss_dev/lib/velocity-dep-1.4.jar ___________________________________________________________________ Name: svn:mime-type + application/octet-stream This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2007-03-18 13:32:18
|
Revision: 358 http://svn.sourceforge.net/egadss/?rev=358&view=rev Author: mcglen Date: 2007-03-17 19:38:38 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Reverting the repository to version 349. Apparently some optimizations I made at the end last year didn't work so well on Windows. Modified Paths: -------------- trunk/egadss/egadss_dev/build.xml trunk/egadss/egadss_dev/src/org/egadss/IKnowledgeMgt.java trunk/egadss/egadss_dev/src/org/egadss/configmanager/ConfigManager.java trunk/egadss/egadss_dev/src/org/egadss/configmanager/Configuration.java trunk/egadss/egadss_dev/src/org/egadss/datastorage/DataStorage.java trunk/egadss/egadss_dev/src/org/egadss/docimpex/DocImpEx.java trunk/egadss/egadss_dev/src/org/egadss/glcompiler/GLCompiler.java trunk/egadss/egadss_dev/src/org/egadss/inferenceengine/InferenceEngine.java trunk/egadss/egadss_dev/src/org/egadss/jsp/ClinetJspConfig.java trunk/egadss/egadss_dev/src/org/egadss/knowledgemanager/KnowledgeManager.java trunk/egadss/egadss_dev/src/org/egadss/transcontroller/TransController.java trunk/egadss/egadss_dev/src/org/egadss/util/EgadssException.java Added Paths: ----------- trunk/egadss/egadss_dev/RMIClientResults.xml trunk/egadss/egadss_dev/auxilaryResources/ trunk/egadss/egadss_dev/auxilaryResources/AuditTrail.txt trunk/egadss/egadss_dev/auxilaryResources/CDANarrativeBlock.CommitteeBallot02.Dec.2003.xsd trunk/egadss/egadss_dev/auxilaryResources/EGADSS_datatypes.xsd trunk/egadss/egadss_dev/auxilaryResources/EgadssConfig.xml trunk/egadss/egadss_dev/auxilaryResources/Flavors.xsd trunk/egadss/egadss_dev/auxilaryResources/Guidelines_0.2.mlm trunk/egadss/egadss_dev/auxilaryResources/InternalFunctions.clp trunk/egadss/egadss_dev/auxilaryResources/NewCDA.xsd trunk/egadss/egadss_dev/auxilaryResources/PatientResults.clp trunk/egadss/egadss_dev/auxilaryResources/PatientResultsInstances.txt trunk/egadss/egadss_dev/auxilaryResources/PatientSummary.xsd trunk/egadss/egadss_dev/auxilaryResources/Results.xsd trunk/egadss/egadss_dev/auxilaryResources/ResultsCDA.xml trunk/egadss/egadss_dev/auxilaryResources/ResultsClasses.clp trunk/egadss/egadss_dev/auxilaryResources/StrucDoc.ActText.MembershipBallot01.Dec.2004.xsd trunk/egadss/egadss_dev/auxilaryResources/StructuredMessage.dtd trunk/egadss/egadss_dev/auxilaryResources/TestPatient1ForTranslationAdvanced.xml trunk/egadss/egadss_dev/auxilaryResources/TestPatientX.xml trunk/egadss/egadss_dev/auxilaryResources/TestPatientY.xml trunk/egadss/egadss_dev/auxilaryResources/TestPatientZ.xml trunk/egadss/egadss_dev/auxilaryResources/clinicalGuideline.xml trunk/egadss/egadss_dev/auxilaryResources/datatypes.xsd trunk/egadss/egadss_dev/auxilaryResources/datatypes_cda.xsd trunk/egadss/egadss_dev/auxilaryResources/more_datatypes_cda.xsd trunk/egadss/egadss_dev/auxilaryResources/patientSummaryStyleSh.xsl trunk/egadss/egadss_dev/auxilaryResources/resultsFromEgadss.xml trunk/egadss/egadss_dev/auxilaryResources/resultsStyleSh.xsl trunk/egadss/egadss_dev/auxilaryResources/resultsTransformed.html trunk/egadss/egadss_dev/auxilaryResources/temporaryXmlFile.xml trunk/egadss/egadss_dev/auxilaryResources/transformedPatientSummary.html trunk/egadss/egadss_dev/auxilaryResources/transformedPatientSummary.xml trunk/egadss/egadss_dev/auxilaryResources/transformedResultsFromEgadss.xml trunk/egadss/egadss_dev/auxilaryResources/voc.xsd trunk/egadss/egadss_dev/auxilaryResources/voc_from_ballot3_download.xsd trunk/egadss/egadss_dev/auxilaryResources/xml.xsd Removed Paths: ------------- trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/ trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/logs/ trunk/egadss/egadss_dev/auxilaryResources/AuditTrail.txt trunk/egadss/egadss_dev/auxilaryResources/CDANarrativeBlock.CommitteeBallot02.Dec.2003.xsd trunk/egadss/egadss_dev/auxilaryResources/EGADSS_datatypes.xsd trunk/egadss/egadss_dev/auxilaryResources/EgadssConfig.xml trunk/egadss/egadss_dev/auxilaryResources/Flavors.xsd trunk/egadss/egadss_dev/auxilaryResources/Guidelines_0.2.mlm trunk/egadss/egadss_dev/auxilaryResources/InternalFunctions.clp trunk/egadss/egadss_dev/auxilaryResources/NewCDA.xsd trunk/egadss/egadss_dev/auxilaryResources/PatientResults.clp trunk/egadss/egadss_dev/auxilaryResources/PatientResultsInstances.txt trunk/egadss/egadss_dev/auxilaryResources/PatientSummary.xsd trunk/egadss/egadss_dev/auxilaryResources/Results.xsd trunk/egadss/egadss_dev/auxilaryResources/ResultsCDA.xml trunk/egadss/egadss_dev/auxilaryResources/ResultsClasses.clp trunk/egadss/egadss_dev/auxilaryResources/StrucDoc.ActText.MembershipBallot01.Dec.2004.xsd trunk/egadss/egadss_dev/auxilaryResources/StructuredMessage.dtd trunk/egadss/egadss_dev/auxilaryResources/TestPatient1ForTranslationAdvanced.xml trunk/egadss/egadss_dev/auxilaryResources/TestPatientX.xml trunk/egadss/egadss_dev/auxilaryResources/TestPatientY.xml trunk/egadss/egadss_dev/auxilaryResources/TestPatientZ.xml trunk/egadss/egadss_dev/auxilaryResources/clinicalGuideline.xml trunk/egadss/egadss_dev/auxilaryResources/datatypes.xsd trunk/egadss/egadss_dev/auxilaryResources/datatypes_cda.xsd trunk/egadss/egadss_dev/auxilaryResources/more_datatypes_cda.xsd trunk/egadss/egadss_dev/auxilaryResources/patientSummaryStyleSh.xsl trunk/egadss/egadss_dev/auxilaryResources/resultsFromEgadss.xml trunk/egadss/egadss_dev/auxilaryResources/resultsStyleSh.xsl trunk/egadss/egadss_dev/auxilaryResources/resultsTransformed.html trunk/egadss/egadss_dev/auxilaryResources/temporaryXmlFile.xml trunk/egadss/egadss_dev/auxilaryResources/transformedPatientSummary.html trunk/egadss/egadss_dev/auxilaryResources/transformedPatientSummary.xml trunk/egadss/egadss_dev/auxilaryResources/transformedResultsFromEgadss.xml trunk/egadss/egadss_dev/auxilaryResources/voc.xsd trunk/egadss/egadss_dev/auxilaryResources/voc_from_ballot3_download.xsd trunk/egadss/egadss_dev/auxilaryResources/xml.xsd trunk/egadss/egadss_dev/lib/velocity-1.4.jar trunk/egadss/egadss_dev/lib/velocity-dep-1.4.jar Copied: trunk/egadss/egadss_dev/RMIClientResults.xml (from rev 349, trunk/egadss/egadss_dev/RMIClientResults.xml) =================================================================== --- trunk/egadss/egadss_dev/RMIClientResults.xml (rev 0) +++ trunk/egadss/egadss_dev/RMIClientResults.xml 2007-03-18 02:38:38 UTC (rev 358) @@ -0,0 +1,241 @@ +<?xml version="1.0" encoding="ISO-8859-1" standalone="yes"?> +<ClinicalDocument xmlns="urn:hl7-org:v3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> + <id assigningAuthorityName="EGADSS" extension="02" root="111"/> + <code code="EGADSS_02" codeSystem="222"/> + <effectiveTime value="20050916"/> + <author> + <time value="20040303"/> + <assignedAuthor> + <id/> + <assignedAuthoringDevice> + <code code="222" codeSystem="222" codeSystemVersion="1"/> + </assignedAuthoringDevice> + </assignedAuthor> + </author> + <custodian> + <assignedCustodian> + <representedCustodianOrganization> + <id/> + <name>EGADSS</name> + </representedCustodianOrganization> + </assignedCustodian> + </custodian> + <recordTarget> + <patient> + <id/> + <patientPatient> + <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"/> + <birthTime value="19660505"/> + <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"/> + </patientPatient> + </patient> + </recordTarget> + <component> + <structuredBody> + <component> + <section> + <code code="111" codeSystem="111"/> + <title>Guideline Recommendations</title> + <entry> + <act classCode="ACT" moodCode="EVN"> + <code code="0.1" codeSystem="1.11.111.1"/> + <text>Recommend Tetnus Booster</text> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_domain_expert" codeSystem="1.11.111.1"/> + <assignedPerson> + <name>Morgan Price, MD -pr...@fa...</name> + </assignedPerson> + </assignedAuthor> + </author> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_encoder" codeSystem="1.11.111.1"/> + <assignedPerson> + <name>Glen McCallum -gl...@eg...</name> + </assignedPerson> + </assignedAuthor> + </author> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_encoding_institution" codeSystem="1.11.111.1"/> + <assignedPerson/> + <representedOrganization> + <name>University of British Columbia, Department of Family Practice</name> + </representedOrganization> + </assignedAuthor> + </author> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="last_encoded_modification" codeSystem="333"/> + <effectiveTime value="20050815"/> + </act> + </entryRelationship> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="recommendation" codeSystem="333"/> + <text/> + <priorityCode code="" codeSystem="444"/> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="111" codeSystem="333"/> + <text/> + </act> + </entryRelationship> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="111" codeSystem="333"/> + <text/> + </act> + </entryRelationship> + </act> + </entryRelationship> + </act> + </entry> + </section> + </component> + <component> + <section> + <code code="111" codeSystem="111"/> + <title>Guideline Recommendations</title> + <entry> + <act classCode="ACT" moodCode="EVN"> + <code code="0.1" codeSystem="1.11.111.1"/> + <text>Tetanus Vaccination Schedule in Adults Td</text> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_domain_expert" codeSystem="1.11.111.1"/> + <assignedPerson> + <name>Morgan Price, MD -pr...@fa...</name> + </assignedPerson> + </assignedAuthor> + </author> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_encoder" codeSystem="1.11.111.1"/> + <assignedPerson> + <name>Glen McCallum -gl...@eg...</name> + </assignedPerson> + </assignedAuthor> + </author> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_encoding_institution" codeSystem="1.11.111.1"/> + <assignedPerson/> + <representedOrganization> + <name>University of British Columbia, Department of Family Practice</name> + </representedOrganization> + </assignedAuthor> + </author> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="last_encoded_modification" codeSystem="333"/> + <effectiveTime value="20050815"/> + </act> + </entryRelationship> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="recommendation" codeSystem="333"/> + <text/> + <priorityCode code="" codeSystem="444"/> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="111" codeSystem="333"/> + <text/> + </act> + </entryRelationship> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="111" codeSystem="333"/> + <text/> + </act> + </entryRelationship> + </act> + </entryRelationship> + </act> + </entry> + </section> + </component> + <component> + <section> + <code code="111" codeSystem="111"/> + <title>Guideline Recommendations</title> + <entry> + <act classCode="ACT" moodCode="EVN"> + <code code="0.1" codeSystem="1.11.111.1"/> + <text>Measles Mumps and Rubella MMR BCCDC Code: MMR</text> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_domain_expert" codeSystem="1.11.111.1"/> + <assignedPerson> + <name>Morgan Price, MD -pr...@fa...</name> + </assignedPerson> + </assignedAuthor> + </author> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_encoder" codeSystem="1.11.111.1"/> + <assignedPerson> + <name>Glen McCallum -gl...@eg...</name> + </assignedPerson> + </assignedAuthor> + </author> + <author> + <time value="20000101"/> + <assignedAuthor> + <id extension="1" root="111"/> + <code code="guideline_encoding_institution" codeSystem="1.11.111.1"/> + <assignedPerson/> + <representedOrganization> + <name>University of British Columbia, Department of Family Practice</name> + </representedOrganization> + </assignedAuthor> + </author> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="last_encoded_modification" codeSystem="333"/> + <effectiveTime value="20050815"/> + </act> + </entryRelationship> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="recommendation" codeSystem="333"/> + <text/> + <priorityCode code="" codeSystem="444"/> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="111" codeSystem="333"/> + <text/> + </act> + </entryRelationship> + <entryRelationship typeCode="COMP"> + <act classCode="ACT" moodCode="EVN"> + <code code="111" codeSystem="333"/> + <text/> + </act> + </entryRelationship> + </act> + </entryRelationship> + </act> + </entry> + </section> + </component> + </structuredBody> + </component> +</ClinicalDocument> Copied: trunk/egadss/egadss_dev/auxilaryResources (from rev 349, trunk/egadss/egadss_dev/auxilaryResources) Deleted: trunk/egadss/egadss_dev/auxilaryResources/AuditTrail.txt =================================================================== --- trunk/egadss/egadss_dev/auxilaryResources/AuditTrail.txt 2006-04-06 22:14:45 UTC (rev 349) +++ trunk/egadss/egadss_dev/auxilaryResources/AuditTrail.txt 2007-03-18 02:38:38 UTC (rev 358) @@ -1,59458 +0,0 @@ -Mon Jan 30 16:20:26 PST 2006Authoring Component: TransController -Log entry: <?xml version="1.0" encoding="UTF-8"?> -<!-- -/*********************************************************/ -/* EGADSS - Evidence-based Guideline and */ -/* Desicion Support System */ -/* */ -/* http://egadss.org */ -/* */ -/* Created on Mar 17, 2005 */ -/* */ -/* */ -/* Principal Investigator: Dr. Morgan Price */ -/* University of British Columbia */ -/* Department of Family Practice */ -/* Suite 211 - 2150 Western Parkway */ -/* Vancouver, British Columbia */ -/* Canada V6T 1V6 */ -/* */ -/* Copyright (C) 2005 University of British Columbia */ -/* */ -/* This program is free software; you can redistribute */ -/* it and/or modify it under the terms of the GNU */ -/* General Public License as published by the Free */ -/* Software Foundation; either version 2 of the License, */ -/* or (at your option) any later version. */ -/* */ -/* This program is distributed in the hope that it will */ -/* be useful, but WITHOUT ANY WARRANTY; without even */ -/* the implied warranty of MERCHANTABILITY or FITNESS */ -/* FOR A PARTICULAR PURPOSE. See the GNU General Public */ -/* License for more details. */ -/* */ -/* You should have received a copy of the GNU General */ -/* Public License along with this program; if not, */ -/* write to the Free Software Foundation, Inc., */ -/* 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ -/*********************************************************/ ---> - -<ClinicalDocument xmlns="urn:hl7-org:v3" - xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> - <id root="111" extension="01" assigningAuthorityName="EGADSS"></id> - <code code="EGADSS_01" codeSystem="222"></code> <!-- "EGADSS_01" stands for “Core Data Set\xE2\x80? --> - <effectiveTime value="20051103"/> <!--yyyymmdd --> - <author> - <time value="20041103"/><!--yyyymmdd --> - <assignedAuthor> - <id/> - <assignedAuthoringDevice> - <code code="111" codeSystem="222" codeSystemVersion="1" displayName="Some EMR"/> - - </assignedAuthoringDevice> - - </assignedAuthor> - - - </author> - <custodian> - <assignedCustodian> - <representedCustodianOrganization> - <id/> - <name>Dr. Flue Practice</name> - </representedCustodianOrganization> - </assignedCustodian> - - </custodian> - <!-- -******************************************************** -Demographics -******************************************************** ---> - <recordTarget> - <patient> - <id/> - <patientPatient> - <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"></administrativeGenderCode> - <birthTime value="19660505"/> - <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"></maritalStatusCode> - </patientPatient> - </patient> - </recordTarget> - <component> - - <structuredBody> - <!-- -******************************************************** - Active Problems section -******************************************************** ---> - <activeProblemsComponent> - <section> - <code code="11450-4" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Active Problems</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="492.8" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Emphysema"/> <!--Emphysema; ICD-9-CM --> - </observation> - - - </entry> - - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="250.x" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Diabetes"/> <!--Emphysema; ICD-9-CM --> - </observation> - - - </entry> - - </section> - </activeProblemsComponent> - - <!-- -******************************************************** - Past Medical History section -******************************************************** ---> - <pastMedicalHisotryComponent> - <section> - <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Past Medical History</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="696.1" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Psoriasis"></code> - </observation> - - - </entry> - </section> - </pastMedicalHisotryComponent> - <!-- -******************************************************** - Surgical History section -******************************************************** ---> - <surgicalHisotryComponent> - <section> - <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Surgical History</title> - <entry> - - <procedure classCode="PROC" moodCode="EVN"> - <code code="47.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Appendectomy"></code> <!--Appendectomy; ICD-9-CM --> - </procedure> - - </entry> - </section> - </surgicalHisotryComponent> - <!-- -******************************************************** - Medications section -******************************************************** ---> - <medicationsComponent> - <section> - <code code="19789-7" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Medications</title> - <entry> - - <substanceAdministration classCode="ActClass" moodCode="EVN"> - <consumable> - <manufacturedProduct> - <manufacturedLabeledDrug> - <code code="00789798" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Acetaminophen 350 Mg"/> <!--Acetaminophen 350 Mg --> - </manufacturedLabeledDrug> - </manufacturedProduct> - </consumable> - </substanceAdministration> - - </entry> - <entry> - - <substanceAdministration classCode="ENTRY" moodCode="EVN"> - <consumable> - <manufacturedProduct> - <manufacturedLabeledDrug> - <code code="02239757" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Bactroban"/> <!--Bactroban --> - </manufacturedLabeledDrug> - </manufacturedProduct> - </consumable> - </substanceAdministration> - - </entry> - - - </section> - </medicationsComponent> - <!-- -******************************************************** - Allergies and Adverse Reactions section -******************************************************** ---> - <allergiesComponent> - <section> - <code code="10123-x" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Allergies and Adverse Reactions</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="271.3" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Lactose Intolerance"></code> <!--Lactose Intolerance ICD-9-CM --> - </observation> - - </entry> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V15.01" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Allergy to peanuts"></code> <!--Allergy to peanuts ICD-9-CM --> - </observation> - - </entry> - - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V14.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of allergy to penecilin"></code> <!--History of allergy to penicillin ICD-9-CM --> - </observation> - - - </entry> - - </section> - </allergiesComponent> - <!-- -******************************************************** - Family History section -******************************************************** ---> - <familyHistoryComponent> - <section> - <code code="10157-6" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Family History</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V180" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Family Hx-Diabetes Mellitus"></code> <!--Family Hx-Diabetes Mellitus ICD-9-CM --> - </observation> - - </entry> - </section> - </familyHistoryComponent> - <!-- -******************************************************** - Immunizations section -******************************************************** ---> - - <immunizationsComponent> - <section> - <code code="11369-6" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Immunizations</title> - <entry> - - <procedure classCode="PROC" moodCode="EVN"> - <code code="Td" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Tetanus, Diphtheria-adult"></code> <!-- Tetanus, Diphtheria - adult BCCDC --> - <effectiveTime value="19820514"/> - </procedure> - - - </entry> - <entry> - <procedure classCode="PROC" moodCode="EVN"> - <code code="YF" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Yellow Fever"></code><!-- Yellow Fever BCCDC --> - <effectiveTime value="20041104"></effectiveTime> - - </procedure> - </entry> - - <entry> - <procedure classCode="PROC" moodCode="EVN"> - <code code="PNEU-C-7" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Pneumococcal Conjugate C-7"></code><!-- Pneumococcal Conjugate C-7 --> - <effectiveTime value="19660511"></effectiveTime> - - </procedure> - </entry> - - <!-- - <entry> - <procedure classCode="PROC" moodCode="EVN"> - <code code="MMR" codeSystemName="BCCDC"></code> Measles Mumps Rubella - <effectiveTime value="19660511"></effectiveTime> - - </procedure> - </entry> - --> - - - </section> - </immunizationsComponent> - <!-- -******************************************************** - Social History section -******************************************************** ---> - <socialHistoryComponent> - <section> - <code code="29762-2" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Social History</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V1582" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of tobacco use"></code> <!--History of tobacco use ICD-9-CM --> - - </observation> - </entry> - - </section> - - </socialHistoryComponent> - - <!-- -******************************************************** - Labs section -******************************************************** ---> - <labsComponent> - <section> - <code code="11502-2" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="Labs"/> - <title>Labs</title> - <entry> - <observation classCode="OBS" moodCode="EVN"> - <code code="4548-4" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="A1C Test"/> - <effectiveTime value="20051108"/> - <value xsi:type="PQ" value="8" unit="%"/> - </observation> - </entry> - </section> - </labsComponent> - - - - </structuredBody> - - </component> -</ClinicalDocument> - -Description: Patient Summary document was received from the external systemMon Jan 30 16:20:28 PST 2006Authoring Component: TransController -Log entry: <?xml version="1.0" encoding="UTF-8"?><ClinicalDocument xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"><id assigningAuthorityName="EGADSS" extension="02" root="111"/><code code="EGADSS_02" codeSystem="222"/><effectiveTime value="20060130"/><author><time value="20040303"/><assignedAuthor><id/><assignedAuthoringDevice><code code="222" codeSystem="222" codeSystemVersion="1"/></assignedAuthoringDevice></assignedAuthor></author><custodian><assignedCustodian><representedCustodianOrganization><id/><name>EGADSS</name></representedCustodianOrganization></assignedCustodian></custodian><recordTarget> - <patient> - <id/> - <patientPatient> - <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"/> - <birthTime value="19660505"/> - <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"/> - </patientPatient> - </patient> - </recordTarget><component><structuredBody><component><section><code code="111" codeSystem="111"/><title>Guideline Recommendations</title><entry><act classCode="ACT" moodCode="EVN"><code code="0.1" codeSystem="1.11.111.1"/><text>Measles Mumps and Rubella - MMR - BCCDC Code: MMR</text><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_domain_expert" codeSystem="1.11.111.1"/><assignedPerson><name>Morgan Price, MD - pri...@fa...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoder" codeSystem="1.11.111.1"/><assignedPerson><name>Glen McCallum - gle...@eg...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoding_institution" codeSystem="1.11.111.1"/><assignedPerson/><representedOrganization><name>University of British Columbia, Department of Family Practice</name></representedOrganization></assignedAuthor></author><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="last_encoded_modification" codeSystem="333"/><effectiveTime value="20050815"/></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="recommendation" codeSystem="333"/><text>IMM: MMR Due</text><priorityCode code="40" codeSystem="444"/><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>No documented MMR in an Adult patient. Single MMR injection recommended today for this patient unless contraindicated -acute illness-. NOTE: If patient is a student, healthcare professional or child care worker, it is recommended that they follow up in >30 days for a booster. Due to a limitation in the alerting system you will not be reminded of this follow up for adult patients.</text></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>Unless contraindicated -acute illness, pregnancy, immunosuppression, etc-, this patient is due for first IM MMR injection.</text></act></entryRelationship></act></entryRelationship></act></entry></section></component><component><section><code code="111" codeSystem="111"/><title>Guideline Recommendations</title><entry><act classCode="ACT" moodCode="EVN"><code code="0.1" codeSystem="1.11.111.1"/><text>Counseling re Hypoglycemic episodes in Diabetics</text><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_domain_expert" codeSystem="1.11.111.1"/><assignedPerson><name>Morgan Price, MD - pri...@fa...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoder" codeSystem="1.11.111.1"/><assignedPerson><name>Glen McCallum - gle...@eg...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoding_institution" codeSystem="1.11.111.1"/><assignedPerson/><representedOrganization><name>University of British Columbia, Department of Family Practice</name></representedOrganization></assignedAuthor></author><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="last_encoded_modification" codeSystem="333"/><effectiveTime value="20051202"/></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="recommendation" codeSystem="333"/><text>Ask about Hypoglycemic Episodes.</text><priorityCode code="40" codeSystem="444"/><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>All diabetic patients should be asked each visit about episodes of hypoglycemia. The shared goal of patient and physician should be to eliminate any hypoglycemia episodes as they are associated with considerable morbidity.</text></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>All diabetic patients should be asked each visit about episodes of hypoglycemia. The shared goal of patient and physician should be to eliminate any hypoglycemia episodes as they are associated with considerable morbidity.</text></act></entryRelationship></act></entryRelationship></act></entry></section></component><component><section><code code="111" codeSystem="111"/><title>Guideline Recommendations</title><entry><act classCode="ACT" moodCode="EVN"><code code="0.1" codeSystem="1.11.111.1"/><text>Routine A1C in Diabetics</text><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_domain_expert" codeSystem="1.11.111.1"/><assignedPerson><name>Morgan Price, MD - pri...@fa...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoder" codeSystem="1.11.111.1"/><assignedPerson><name>Glen McCallum - gle...@eg...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoding_institution" codeSystem="1.11.111.1"/><assignedPerson/><representedOrganization><name>University of British Columbia, Department of Family Practice</name></representedOrganization></assignedAuthor></author><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="last_encoded_modification" codeSystem="333"/><effectiveTime value="20060119"/></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="recommendation" codeSystem="333"/><text>Diabetes: Last A1C > 7%</text><priorityCode code="60" codeSystem="444"/><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>The target goal for A1C is 6-7%. This patient's A1C is above target. Consider discussing lifestyle, diet and therapy with the patient to better control blood sugars.</text></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>The target goal for A1C is 6-7%. This patient's A1C is above target. Consider discussing lifestyle, diet and therapy with the patient to better control blood sugars.</text></act></entryRelationship></act></entryRelationship></act></entry></section></component></structuredBody></component></ClinicalDocument> -Description: Results document was sent to the external systemMon Jan 30 16:30:52 PST 2006Authoring Component: TransController -Log entry: <?xml version="1.0" encoding="UTF-8"?> -<!-- -/*********************************************************/ -/* EGADSS - Evidence-based Guideline and */ -/* Desicion Support System */ -/* */ -/* http://egadss.org */ -/* */ -/* Created on Mar 17, 2005 */ -/* */ -/* */ -/* Principal Investigator: Dr. Morgan Price */ -/* University of British Columbia */ -/* Department of Family Practice */ -/* Suite 211 - 2150 Western Parkway */ -/* Vancouver, British Columbia */ -/* Canada V6T 1V6 */ -/* */ -/* Copyright (C) 2005 University of British Columbia */ -/* */ -/* This program is free software; you can redistribute */ -/* it and/or modify it under the terms of the GNU */ -/* General Public License as published by the Free */ -/* Software Foundation; either version 2 of the License, */ -/* or (at your option) any later version. */ -/* */ -/* This program is distributed in the hope that it will */ -/* be useful, but WITHOUT ANY WARRANTY; without even */ -/* the implied warranty of MERCHANTABILITY or FITNESS */ -/* FOR A PARTICULAR PURPOSE. See the GNU General Public */ -/* License for more details. */ -/* */ -/* You should have received a copy of the GNU General */ -/* Public License along with this program; if not, */ -/* write to the Free Software Foundation, Inc., */ -/* 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ -/*********************************************************/ ---> - -<ClinicalDocument xmlns="urn:hl7-org:v3" - xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> - <id root="111" extension="01" assigningAuthorityName="EGADSS"></id> - <code code="EGADSS_01" codeSystem="222"></code> <!-- "EGADSS_01" stands for “Core Data Set\xE2\x80? --> - <effectiveTime value="20051103"/> <!--yyyymmdd --> - <author> - <time value="20041103"/><!--yyyymmdd --> - <assignedAuthor> - <id/> - <assignedAuthoringDevice> - <code code="111" codeSystem="222" codeSystemVersion="1" displayName="Some EMR"/> - - </assignedAuthoringDevice> - - </assignedAuthor> - - - </author> - <custodian> - <assignedCustodian> - <representedCustodianOrganization> - <id/> - <name>Dr. Flue Practice</name> - </representedCustodianOrganization> - </assignedCustodian> - - </custodian> - <!-- -******************************************************** -Demographics -******************************************************** ---> - <recordTarget> - <patient> - <id/> - <patientPatient> - <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"></administrativeGenderCode> - <birthTime value="19660505"/> - <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"></maritalStatusCode> - </patientPatient> - </patient> - </recordTarget> - <component> - - <structuredBody> - <!-- -******************************************************** - Active Problems section -******************************************************** ---> - <activeProblemsComponent> - <section> - <code code="11450-4" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Active Problems</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="492.8" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Emphysema"/> <!--Emphysema; ICD-9-CM --> - </observation> - - - </entry> - - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="250.x" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Diabetes"/> <!--Emphysema; ICD-9-CM --> - </observation> - - - </entry> - - </section> - </activeProblemsComponent> - - <!-- -******************************************************** - Past Medical History section -******************************************************** ---> - <pastMedicalHisotryComponent> - <section> - <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Past Medical History</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="696.1" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Psoriasis"></code> - </observation> - - - </entry> - </section> - </pastMedicalHisotryComponent> - <!-- -******************************************************** - Surgical History section -******************************************************** ---> - <surgicalHisotryComponent> - <section> - <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Surgical History</title> - <entry> - - <procedure classCode="PROC" moodCode="EVN"> - <code code="47.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Appendectomy"></code> <!--Appendectomy; ICD-9-CM --> - </procedure> - - </entry> - </section> - </surgicalHisotryComponent> - <!-- -******************************************************** - Medications section -******************************************************** ---> - <medicationsComponent> - <section> - <code code="19789-7" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Medications</title> - <entry> - - <substanceAdministration classCode="ActClass" moodCode="EVN"> - <consumable> - <manufacturedProduct> - <manufacturedLabeledDrug> - <code code="00789798" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Acetaminophen 350 Mg"/> <!--Acetaminophen 350 Mg --> - </manufacturedLabeledDrug> - </manufacturedProduct> - </consumable> - </substanceAdministration> - - </entry> - <entry> - - <substanceAdministration classCode="ENTRY" moodCode="EVN"> - <consumable> - <manufacturedProduct> - <manufacturedLabeledDrug> - <code code="02239757" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Bactroban"/> <!--Bactroban --> - </manufacturedLabeledDrug> - </manufacturedProduct> - </consumable> - </substanceAdministration> - - </entry> - - - </section> - </medicationsComponent> - <!-- -******************************************************** - Allergies and Adverse Reactions section -******************************************************** ---> - <allergiesComponent> - <section> - <code code="10123-x" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Allergies and Adverse Reactions</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="271.3" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Lactose Intolerance"></code> <!--Lactose Intolerance ICD-9-CM --> - </observation> - - </entry> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V15.01" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Allergy to peanuts"></code> <!--Allergy to peanuts ICD-9-CM --> - </observation> - - </entry> - - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V14.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of allergy to penecilin"></code> <!--History of allergy to penicillin ICD-9-CM --> - </observation> - - - </entry> - - </section> - </allergiesComponent> - <!-- -******************************************************** - Family History section -******************************************************** ---> - <familyHistoryComponent> - <section> - <code code="10157-6" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Family History</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V180" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Family Hx-Diabetes Mellitus"></code> <!--Family Hx-Diabetes Mellitus ICD-9-CM --> - </observation> - - </entry> - </section> - </familyHistoryComponent> - <!-- -******************************************************** - Immunizations section -******************************************************** ---> - - <immunizationsComponent> - <section> - <code code="11369-6" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Immunizations</title> - <entry> - - <procedure classCode="PROC" moodCode="EVN"> - <code code="Td" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Tetanus, Diphtheria-adult"></code> <!-- Tetanus, Diphtheria - adult BCCDC --> - <effectiveTime value="19820514"/> - </procedure> - - - </entry> - <entry> - <procedure classCode="PROC" moodCode="EVN"> - <code code="YF" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Yellow Fever"></code><!-- Yellow Fever BCCDC --> - <effectiveTime value="20041104"></effectiveTime> - - </procedure> - </entry> - - <entry> - <procedure classCode="PROC" moodCode="EVN"> - <code code="PNEU-C-7" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Pneumococcal Conjugate C-7"></code><!-- Pneumococcal Conjugate C-7 --> - <effectiveTime value="19660511"></effectiveTime> - - </procedure> - </entry> - - <!-- - <entry> - <procedure classCode="PROC" moodCode="EVN"> - <code code="MMR" codeSystemName="BCCDC"></code> Measles Mumps Rubella - <effectiveTime value="19660511"></effectiveTime> - - </procedure> - </entry> - --> - - - </section> - </immunizationsComponent> - <!-- -******************************************************** - Social History section -******************************************************** ---> - <socialHistoryComponent> - <section> - <code code="29762-2" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Social History</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="V1582" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of tobacco use"></code> <!--History of tobacco use ICD-9-CM --> - - </observation> - </entry> - - </section> - - </socialHistoryComponent> - - <!-- -******************************************************** - Labs section -******************************************************** ---> - <labsComponent> - <section> - <code code="11502-2" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="Labs"/> - <title>Labs</title> - <entry> - <observation classCode="OBS" moodCode="EVN"> - <code code="4548-4" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="A1C Test"/> - <effectiveTime value="20051108"/> - <value xsi:type="PQ" value="8" unit="%"/> - </observation> - </entry> - </section> - </labsComponent> - - - - </structuredBody> - - </component> -</ClinicalDocument> - -Description: Patient Summary document was received from the external systemMon Jan 30 16:40:54 PST 2006Authoring Component: TransController -Log entry: <?xml version="1.0" encoding="UTF-8"?> -<!-- -/*********************************************************/ -/* EGADSS - Evidence-based Guideline and */ -/* Desicion Support System */ -/* */ -/* http://egadss.org */ -/* */ -/* Created on Mar 17, 2005 */ -/* */ -/* */ -/* Principal Investigator: Dr. Morgan Price */ -/* University of British Columbia */ -/* Department of Family Practice */ -/* Suite 211 - 2150 Western Parkway */ -/* Vancouver, British Columbia */ -/* Canada V6T 1V6 */ -/* */ -/* Copyright (C) 2005 University of British Columbia */ -/* */ -/* This program is free software; you can redistribute */ -/* it and/or modify it under the terms of the GNU */ -/* General Public License as published by the Free */ -/* Software Foundation; either version 2 of the License, */ -/* or (at your option) any later version. */ -/* */ -/* This program is distributed in the hope that it will */ -/* be useful, but WITHOUT ANY WARRANTY; without even */ -/* the implied warranty of MERCHANTABILITY or FITNESS */ -/* FOR A PARTICULAR PURPOSE. See the GNU General Public */ -/* License for more details. */ -/* */ -/* You should have received a copy of the GNU General */ -/* Public License along with this program; if not, */ -/* write to the Free Software Foundation, Inc., */ -/* 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ -/*********************************************************/ ---> - -<ClinicalDocument xmlns="urn:hl7-org:v3" - xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> - <id root="111" extension="01" assigningAuthorityName="EGADSS"></id> - <code code="EGADSS_01" codeSystem="222"></code> <!-- "EGADSS_01" stands for “Core Data Set\xE2\x80? --> - <effectiveTime value="20051103"/> <!--yyyymmdd --> - <author> - <time value="20041103"/><!--yyyymmdd --> - <assignedAuthor> - <id/> - <assignedAuthoringDevice> - <code code="111" codeSystem="222" codeSystemVersion="1" displayName="Some EMR"/> - - </assignedAuthoringDevice> - - </assignedAuthor> - - - </author> - <custodian> - <assignedCustodian> - <representedCustodianOrganization> - <id/> - <name>Dr. Flue Practice</name> - </representedCustodianOrganization> - </assignedCustodian> - - </custodian> - <!-- -******************************************************** -Demographics -******************************************************** ---> - <recordTarget> - <patient> - <id/> - <patientPatient> - <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"></administrativeGenderCode> - <birthTime value="19660505"/> - <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"></maritalStatusCode> - </patientPatient> - </patient> - </recordTarget> - <component> - - <structuredBody> - <!-- -******************************************************** - Active Problems section -******************************************************** ---> - <activeProblemsComponent> - <section> - <code code="11450-4" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Active Problems</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="492.8" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Emphysema"/> <!--Emphysema; ICD-9-CM --> - </observation> - - - </entry> - - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="250.x" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Diabetes"/> <!--Emphysema; ICD-9-CM --> - </observation> - - - </entry> - - </section> - </activeProblemsComponent> - - <!-- -******************************************************** - Past Medical History section -******************************************************** ---> - <pastMedicalHisotryComponent> - <section> - <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> - <title>Past Medical History</title> - <entry> - - <observation classCode="OBS" moodCode="EVN"> - <code code="696.1" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Psoriasis"></code> - </observation> - - - </entry> - </section> - </pastMedicalHisotryComponent> - <!-- -********************************************... [truncated message content] |
From: <mc...@us...> - 2007-03-18 13:30:41
|
Revision: 362 http://svn.sourceforge.net/egadss/?rev=362&view=rev Author: mcglen Date: 2007-03-17 19:49:43 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Added Paths: ----------- trunk/egadss/egadss_dev/lib/velocity-1.4.jar Added: trunk/egadss/egadss_dev/lib/velocity-1.4.jar =================================================================== (Binary files differ) Property changes on: trunk/egadss/egadss_dev/lib/velocity-1.4.jar ___________________________________________________________________ Name: svn:mime-type + application/octet-stream This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2007-03-18 12:37:44
|
Revision: 364 http://svn.sourceforge.net/egadss/?rev=364&view=rev Author: mcglen Date: 2007-03-17 21:03:58 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Modified Paths: -------------- trunk/egadss/egadss_dev/auxiliaryResources/EgadssConfig.xml Modified: trunk/egadss/egadss_dev/auxiliaryResources/EgadssConfig.xml =================================================================== --- trunk/egadss/egadss_dev/auxiliaryResources/EgadssConfig.xml 2007-03-18 02:50:08 UTC (rev 363) +++ trunk/egadss/egadss_dev/auxiliaryResources/EgadssConfig.xml 2007-03-18 04:03:58 UTC (rev 364) @@ -1,20 +1,20 @@ <?xml version="1.0" encoding="UTF-8"?> <configInfo> - <PatientSummarySchema value="C:/Documents and Settings/Iryna/auxiliaryResources/PatientSummary.xsd"/> - <ResultsSchema value="C:/Documents and Settings/Iryna/auxiliaryResources/Results.xsd"/> - <ArdenMessageDtd value="C:/Documents and Settings/Iryna/auxiliaryResources/StructuredMessage.dtd"/> - <InternalFunctionsClp value="C:/Documents and Settings/Iryna/auxiliaryResources/InternalFunctions.clp"/> - <ResultsClassesClp value="C:/Documents and Settings/Iryna/auxiliaryResources/ResultsClasses.clp"/> - <PatientResultInstancesClp value="C:/Documents and Settings/Iryna/auxiliaryResources/PatientResults.clp"/> - <KnowledgeModuleMlm value="C:/Documents and Settings/Iryna/auxiliaryResources/Guidelines_0.2.mlm"/> + <PatientSummarySchema value="C:/Documents and Settings/glenm/auxiliaryResources/PatientSummary.xsd"/> + <ResultsSchema value="C:/Documents and Settings/glenm/auxiliaryResources/Results.xsd"/> + <ArdenMessageDtd value="C:/Documents and Settings/glenm/auxiliaryResources/StructuredMessage.dtd"/> + <InternalFunctionsClp value="C:/Documents and Settings/glenm/auxiliaryResources/InternalFunctions.clp"/> + <ResultsClassesClp value="C:/Documents and Settings/glenm/auxiliaryResources/ResultsClasses.clp"/> + <PatientResultInstancesClp value="C:/Documents and Settings/glenm/auxiliaryResources/PatientResults.clp"/> + <KnowledgeModuleMlm value="C:/Documents and Settings/glenm/auxiliaryResources/Guidelines_0.2.mlm"/> <KnowledgeModuleName value="Guidelines"/> - <TestPatientXml value="C:/Documents and Settings/Iryna/auxiliaryResources/TestPatient1ForTranslationAdvanced.xml"/> + <TestPatientXml value="C:/Documents and Settings/glenm/auxiliaryResources/TestPatient1ForTranslationAdvanced.xml"/> - <TestPatientX value="C:/Documents and Settings/Iryna/auxiliaryResources/TestPatientX.xml"/> - <TestPatientY value="C:/Documents and Settings/Iryna/auxiliaryResources/TestPatientY.xml"/> - <TestPatientZ value="C:/Documents and Settings/Iryna/auxiliaryResources/TestPatientZ.xml"/> + <TestPatientX value="C:/Documents and Settings/glenm/auxiliaryResources/TestPatientX.xml"/> + <TestPatientY value="C:/Documents and Settings/glenm/auxiliaryResources/TestPatientY.xml"/> + <TestPatientZ value="C:/Documents and Settings/glenm/auxiliaryResources/TestPatientZ.xml"/> <VelocityClinicalGuideline value="C:/EGADSS_DEV/EgadssJBProject/src/org/egadss/docimpex/"/> - <VelocityTemplates value="C:/Documents and Settings/Iryna/auxiliaryResources/"/> + <VelocityTemplates value="C:/Documents and Settings/glenm/auxiliaryResources/"/> - <TestPatientXml value="C:/Documents and Settings/Iryna/auxiliaryResources/AuditTrail.txt"/> + <TestPatientXml value="C:/Documents and Settings/glenm/auxiliaryResources/AuditTrail.txt"/> </configInfo> \ No newline at end of file This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2007-03-18 12:37:41
|
Revision: 359 http://svn.sourceforge.net/egadss/?rev=359&view=rev Author: mcglen Date: 2007-03-17 19:39:47 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Correcting spelling mistake auxilaryResources. Added Paths: ----------- trunk/egadss/egadss_dev/auxiliaryResources/ Removed Paths: ------------- trunk/egadss/egadss_dev/auxilaryResources/ Copied: trunk/egadss/egadss_dev/auxiliaryResources (from rev 358, trunk/egadss/egadss_dev/auxilaryResources) This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2007-03-18 12:34:48
|
Revision: 365 http://svn.sourceforge.net/egadss/?rev=365&view=rev Author: mcglen Date: 2007-03-17 21:04:13 -0700 (Sat, 17 Mar 2007) Log Message: ----------- Modified Paths: -------------- trunk/egadss/egadss_dev/README Modified: trunk/egadss/egadss_dev/README =================================================================== --- trunk/egadss/egadss_dev/README 2007-03-18 04:03:58 UTC (rev 364) +++ trunk/egadss/egadss_dev/README 2007-03-18 04:04:13 UTC (rev 365) @@ -1,4 +1,4 @@ -README file for EGADSS 0.3.0 +README file for EGADSS 0.3.1 EGADSS is an open source tool that is designed to work in conjunction with primary care Electronic Medical Record (EMR) systems to provide patient specific point of care reminders in order to aid physicians provide high quality care. EGADSS is designed as a stand alone system that would respond to requests from existing Electronic Medical Records to provide patient specific clinical guidance based on its internal collection of guidelines. Centralizing guideline management under one tool (EGADSS) permits easier maintenance of the content. EGADSS will focus, initially, on preventive care reminders. The project began May 20, 2004 through a collaboration between members of the UBC Department of Family Practice, UVic's School of Health Information Science and Computer Science Department, CHIi, the National Research Council, and support from Vancouver Coastal Health . @@ -12,12 +12,12 @@ Outline: 1. Preamble 2. Requirements -3. Installation +3. How to Run EGADSS on Apache Tomcat 4. Usage 5. Known Issues 1. ------Preamble------ - + EGADSS was written, compiled, and packaged by Iryna Bilykh (iry...@eg...), Glen McCallum (gle...@eg...), and Dr. Morgan Price (pri...@fa...) with technical guidance from Dr. Jens Jahnke (je...@uv...). The inference engine has jclips at its core (http://www.cs.vu.nl/~mrmenken/jclips/). Xerces is used for formatting XML output (http://xml.apache.org/xerces2-j/). The installer was generated using izpack (http://www.izforge.com/izpack/). EGADSS is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, version 2 of the License. @@ -33,20 +33,19 @@ Apache Tomcat Version 5.5 (http://tomcat.apache.org) Apache Axis Version 1.3 (http://ws.apache.org/axis) -3. ------Installation------ +3. ------How to Run EGADSS on Apache Tomcat------ - a) Install and start apache tomcat. - b) Unzip auxiliaryResources directory and all files contained therein and put in your home directory (ensure that this dir and files have read, write, and execute permissions allowed) (also be sure that spelling of auxiliaryResources is correct ... mispelled in cvs). - c) Open auxiliaryResources/EgadssConfig.xml and change path to be correct on your local machine. - d) Upload EgadssWebModule.war through Apache Tomcat Manager. - e) Web Service will be available at http://<insert-your-url>:10800/EgadssWebModule/services/SimpleWebService" - f) Test Page will be available at http://<insert-your-url>:10800/EgadssWebModule/EgadssTestPage.jsp" + a) Copy (or move) the 'jclips' folder to a location on your filesystem that does not contain any spaces in the path. + b) Copy (or move) the 'auxiliaryResources' folder to your user home directory. + c) In the new location of 'auxiliaryResources', open 'EgadssConfig.xml' and update to filepaths to reflect the location in your user home directory. + d) In 'apache-tomcat-5.5.15/bin', open catalina.bat (or catalina.sh) and set the new path to the jclips library folder. + e) In 'apache-tomcat-5.5.15/bin', start tomcat by executing starup.bat (or startup.sh) + f) Web Service will be available at http://localhost:10800/EgadssWebModule/services/SimpleWebService" + g) Test Page will be available at http://localhost:10800/EgadssWebModule/PatientSelection.jsp" - Egadss is also available as a Jar for embedded applications. - 4. ------Build and Usage------ From the command line: a) Navigate to the base dir of egadss installation (from this point on referred to as "EGADSS_HOME") Note: "EGADSS_HOME" must not have spaces in the directory path). b) Open build.xml and alter the properties Tomcat.home and Axis.home to point to your local installation of tomcat and axis. - c) Type 'ant' (or type 'ant -p' to see build options). \ No newline at end of file + c) Type 'ant rebuildall' (or type 'ant -p' to see build options). \ No newline at end of file This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2006-05-18 19:02:35
|
Revision: 357 Author: mcglen Date: 2006-05-18 12:02:14 -0700 (Thu, 18 May 2006) ViewCVS: http://svn.sourceforge.net/egadss/?rev=357&view=rev Log Message: ----------- Paying off debt (general cleanup) and reengineered/refactored configuration and external file access as discussed on the list. Modified Paths: -------------- trunk/egadss/egadss_dev/build.xml trunk/egadss/egadss_dev/src/org/egadss/configmanager/ConfigManager.java trunk/egadss/egadss_dev/src/org/egadss/configmanager/Configuration.java trunk/egadss/egadss_dev/src/org/egadss/datastorage/DataStorage.java trunk/egadss/egadss_dev/src/org/egadss/docimpex/DocImpEx.java trunk/egadss/egadss_dev/src/org/egadss/jsp/ClinetJspConfig.java trunk/egadss/egadss_dev/src/org/egadss/knowledgemanager/KnowledgeManager.java trunk/egadss/egadss_dev/src/org/egadss/transcontroller/TransController.java trunk/egadss/egadss_dev/src/org/egadss/util/EgadssException.java Added Paths: ----------- trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/ trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/AuditTrail.txt trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/CDANarrativeBlock.CommitteeBallot02.Dec.2003.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/EGADSS_datatypes.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/EgadssConfig.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/Flavors.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/Guidelines_0.2.mlm trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/InternalFunctions.clp trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/NewCDA.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/PatientResults.clp trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/PatientResultsInstances.txt trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/PatientSummary.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/Results.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/ResultsCDA.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/ResultsClasses.clp trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/StrucDoc.ActText.MembershipBallot01.Dec.2004.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/StructuredMessage.dtd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/TestPatient1ForTranslationAdvanced.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/TestPatientX.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/TestPatientY.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/TestPatientZ.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/clinicalGuideline.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/datatypes.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/datatypes_cda.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/more_datatypes_cda.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/patientSummaryStyleSh.xsl trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/resultsFromEgadss.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/resultsStyleSh.xsl trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/resultsTransformed.html trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/temporaryXmlFile.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/transformedPatientSummary.html trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/transformedPatientSummary.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/transformedResultsFromEgadss.xml trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/voc.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/voc_from_ballot3_download.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/xml.xsd trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/logs/ trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/logs/readme.txt Removed Paths: ------------- trunk/egadss/egadss_dev/auxiliaryResources/ Added: trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/AuditTrail.txt =================================================================== --- trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/AuditTrail.txt (rev 0) +++ trunk/egadss/egadss_dev/EgadssWebModule/WEB-INF/conf/AuditTrail.txt 2006-05-18 19:02:14 UTC (rev 357) @@ -0,0 +1,59458 @@ +Mon Jan 30 16:20:26 PST 2006Authoring Component: TransController +Log entry: <?xml version="1.0" encoding="UTF-8"?> +<!-- +/*********************************************************/ +/* EGADSS - Evidence-based Guideline and */ +/* Desicion Support System */ +/* */ +/* http://egadss.org */ +/* */ +/* Created on Mar 17, 2005 */ +/* */ +/* */ +/* Principal Investigator: Dr. Morgan Price */ +/* University of British Columbia */ +/* Department of Family Practice */ +/* Suite 211 - 2150 Western Parkway */ +/* Vancouver, British Columbia */ +/* Canada V6T 1V6 */ +/* */ +/* Copyright (C) 2005 University of British Columbia */ +/* */ +/* This program is free software; you can redistribute */ +/* it and/or modify it under the terms of the GNU */ +/* General Public License as published by the Free */ +/* Software Foundation; either version 2 of the License, */ +/* or (at your option) any later version. */ +/* */ +/* This program is distributed in the hope that it will */ +/* be useful, but WITHOUT ANY WARRANTY; without even */ +/* the implied warranty of MERCHANTABILITY or FITNESS */ +/* FOR A PARTICULAR PURPOSE. See the GNU General Public */ +/* License for more details. */ +/* */ +/* You should have received a copy of the GNU General */ +/* Public License along with this program; if not, */ +/* write to the Free Software Foundation, Inc., */ +/* 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ +/*********************************************************/ +--> + +<ClinicalDocument xmlns="urn:hl7-org:v3" + xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> + <id root="111" extension="01" assigningAuthorityName="EGADSS"></id> + <code code="EGADSS_01" codeSystem="222"></code> <!-- "EGADSS_01" stands for “Core Data Set\xE2\x80? --> + <effectiveTime value="20051103"/> <!--yyyymmdd --> + <author> + <time value="20041103"/><!--yyyymmdd --> + <assignedAuthor> + <id/> + <assignedAuthoringDevice> + <code code="111" codeSystem="222" codeSystemVersion="1" displayName="Some EMR"/> + + </assignedAuthoringDevice> + + </assignedAuthor> + + + </author> + <custodian> + <assignedCustodian> + <representedCustodianOrganization> + <id/> + <name>Dr. Flue Practice</name> + </representedCustodianOrganization> + </assignedCustodian> + + </custodian> + <!-- +******************************************************** +Demographics +******************************************************** +--> + <recordTarget> + <patient> + <id/> + <patientPatient> + <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"></administrativeGenderCode> + <birthTime value="19660505"/> + <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"></maritalStatusCode> + </patientPatient> + </patient> + </recordTarget> + <component> + + <structuredBody> + <!-- +******************************************************** + Active Problems section +******************************************************** +--> + <activeProblemsComponent> + <section> + <code code="11450-4" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Active Problems</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="492.8" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Emphysema"/> <!--Emphysema; ICD-9-CM --> + </observation> + + + </entry> + + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="250.x" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Diabetes"/> <!--Emphysema; ICD-9-CM --> + </observation> + + + </entry> + + </section> + </activeProblemsComponent> + + <!-- +******************************************************** + Past Medical History section +******************************************************** +--> + <pastMedicalHisotryComponent> + <section> + <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Past Medical History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="696.1" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Psoriasis"></code> + </observation> + + + </entry> + </section> + </pastMedicalHisotryComponent> + <!-- +******************************************************** + Surgical History section +******************************************************** +--> + <surgicalHisotryComponent> + <section> + <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Surgical History</title> + <entry> + + <procedure classCode="PROC" moodCode="EVN"> + <code code="47.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Appendectomy"></code> <!--Appendectomy; ICD-9-CM --> + </procedure> + + </entry> + </section> + </surgicalHisotryComponent> + <!-- +******************************************************** + Medications section +******************************************************** +--> + <medicationsComponent> + <section> + <code code="19789-7" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Medications</title> + <entry> + + <substanceAdministration classCode="ActClass" moodCode="EVN"> + <consumable> + <manufacturedProduct> + <manufacturedLabeledDrug> + <code code="00789798" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Acetaminophen 350 Mg"/> <!--Acetaminophen 350 Mg --> + </manufacturedLabeledDrug> + </manufacturedProduct> + </consumable> + </substanceAdministration> + + </entry> + <entry> + + <substanceAdministration classCode="ENTRY" moodCode="EVN"> + <consumable> + <manufacturedProduct> + <manufacturedLabeledDrug> + <code code="02239757" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Bactroban"/> <!--Bactroban --> + </manufacturedLabeledDrug> + </manufacturedProduct> + </consumable> + </substanceAdministration> + + </entry> + + + </section> + </medicationsComponent> + <!-- +******************************************************** + Allergies and Adverse Reactions section +******************************************************** +--> + <allergiesComponent> + <section> + <code code="10123-x" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Allergies and Adverse Reactions</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="271.3" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Lactose Intolerance"></code> <!--Lactose Intolerance ICD-9-CM --> + </observation> + + </entry> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V15.01" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Allergy to peanuts"></code> <!--Allergy to peanuts ICD-9-CM --> + </observation> + + </entry> + + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V14.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of allergy to penecilin"></code> <!--History of allergy to penicillin ICD-9-CM --> + </observation> + + + </entry> + + </section> + </allergiesComponent> + <!-- +******************************************************** + Family History section +******************************************************** +--> + <familyHistoryComponent> + <section> + <code code="10157-6" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Family History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V180" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Family Hx-Diabetes Mellitus"></code> <!--Family Hx-Diabetes Mellitus ICD-9-CM --> + </observation> + + </entry> + </section> + </familyHistoryComponent> + <!-- +******************************************************** + Immunizations section +******************************************************** +--> + + <immunizationsComponent> + <section> + <code code="11369-6" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Immunizations</title> + <entry> + + <procedure classCode="PROC" moodCode="EVN"> + <code code="Td" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Tetanus, Diphtheria-adult"></code> <!-- Tetanus, Diphtheria - adult BCCDC --> + <effectiveTime value="19820514"/> + </procedure> + + + </entry> + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="YF" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Yellow Fever"></code><!-- Yellow Fever BCCDC --> + <effectiveTime value="20041104"></effectiveTime> + + </procedure> + </entry> + + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="PNEU-C-7" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Pneumococcal Conjugate C-7"></code><!-- Pneumococcal Conjugate C-7 --> + <effectiveTime value="19660511"></effectiveTime> + + </procedure> + </entry> + + <!-- + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="MMR" codeSystemName="BCCDC"></code> Measles Mumps Rubella + <effectiveTime value="19660511"></effectiveTime> + + </procedure> + </entry> + --> + + + </section> + </immunizationsComponent> + <!-- +******************************************************** + Social History section +******************************************************** +--> + <socialHistoryComponent> + <section> + <code code="29762-2" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Social History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V1582" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of tobacco use"></code> <!--History of tobacco use ICD-9-CM --> + + </observation> + </entry> + + </section> + + </socialHistoryComponent> + + <!-- +******************************************************** + Labs section +******************************************************** +--> + <labsComponent> + <section> + <code code="11502-2" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="Labs"/> + <title>Labs</title> + <entry> + <observation classCode="OBS" moodCode="EVN"> + <code code="4548-4" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="A1C Test"/> + <effectiveTime value="20051108"/> + <value xsi:type="PQ" value="8" unit="%"/> + </observation> + </entry> + </section> + </labsComponent> + + + + </structuredBody> + + </component> +</ClinicalDocument> + +Description: Patient Summary document was received from the external systemMon Jan 30 16:20:28 PST 2006Authoring Component: TransController +Log entry: <?xml version="1.0" encoding="UTF-8"?><ClinicalDocument xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"><id assigningAuthorityName="EGADSS" extension="02" root="111"/><code code="EGADSS_02" codeSystem="222"/><effectiveTime value="20060130"/><author><time value="20040303"/><assignedAuthor><id/><assignedAuthoringDevice><code code="222" codeSystem="222" codeSystemVersion="1"/></assignedAuthoringDevice></assignedAuthor></author><custodian><assignedCustodian><representedCustodianOrganization><id/><name>EGADSS</name></representedCustodianOrganization></assignedCustodian></custodian><recordTarget> + <patient> + <id/> + <patientPatient> + <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"/> + <birthTime value="19660505"/> + <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"/> + </patientPatient> + </patient> + </recordTarget><component><structuredBody><component><section><code code="111" codeSystem="111"/><title>Guideline Recommendations</title><entry><act classCode="ACT" moodCode="EVN"><code code="0.1" codeSystem="1.11.111.1"/><text>Measles Mumps and Rubella - MMR - BCCDC Code: MMR</text><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_domain_expert" codeSystem="1.11.111.1"/><assignedPerson><name>Morgan Price, MD - pri...@fa...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoder" codeSystem="1.11.111.1"/><assignedPerson><name>Glen McCallum - gle...@eg...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoding_institution" codeSystem="1.11.111.1"/><assignedPerson/><representedOrganization><name>University of British Columbia, Department of Family Practice</name></representedOrganization></assignedAuthor></author><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="last_encoded_modification" codeSystem="333"/><effectiveTime value="20050815"/></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="recommendation" codeSystem="333"/><text>IMM: MMR Due</text><priorityCode code="40" codeSystem="444"/><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>No documented MMR in an Adult patient. Single MMR injection recommended today for this patient unless contraindicated -acute illness-. NOTE: If patient is a student, healthcare professional or child care worker, it is recommended that they follow up in >30 days for a booster. Due to a limitation in the alerting system you will not be reminded of this follow up for adult patients.</text></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>Unless contraindicated -acute illness, pregnancy, immunosuppression, etc-, this patient is due for first IM MMR injection.</text></act></entryRelationship></act></entryRelationship></act></entry></section></component><component><section><code code="111" codeSystem="111"/><title>Guideline Recommendations</title><entry><act classCode="ACT" moodCode="EVN"><code code="0.1" codeSystem="1.11.111.1"/><text>Counseling re Hypoglycemic episodes in Diabetics</text><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_domain_expert" codeSystem="1.11.111.1"/><assignedPerson><name>Morgan Price, MD - pri...@fa...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoder" codeSystem="1.11.111.1"/><assignedPerson><name>Glen McCallum - gle...@eg...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoding_institution" codeSystem="1.11.111.1"/><assignedPerson/><representedOrganization><name>University of British Columbia, Department of Family Practice</name></representedOrganization></assignedAuthor></author><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="last_encoded_modification" codeSystem="333"/><effectiveTime value="20051202"/></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="recommendation" codeSystem="333"/><text>Ask about Hypoglycemic Episodes.</text><priorityCode code="40" codeSystem="444"/><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>All diabetic patients should be asked each visit about episodes of hypoglycemia. The shared goal of patient and physician should be to eliminate any hypoglycemia episodes as they are associated with considerable morbidity.</text></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>All diabetic patients should be asked each visit about episodes of hypoglycemia. The shared goal of patient and physician should be to eliminate any hypoglycemia episodes as they are associated with considerable morbidity.</text></act></entryRelationship></act></entryRelationship></act></entry></section></component><component><section><code code="111" codeSystem="111"/><title>Guideline Recommendations</title><entry><act classCode="ACT" moodCode="EVN"><code code="0.1" codeSystem="1.11.111.1"/><text>Routine A1C in Diabetics</text><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_domain_expert" codeSystem="1.11.111.1"/><assignedPerson><name>Morgan Price, MD - pri...@fa...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoder" codeSystem="1.11.111.1"/><assignedPerson><name>Glen McCallum - gle...@eg...</name></assignedPerson></assignedAuthor></author><author><time value="20000101"/><assignedAuthor><id extension="1" root="111"/><code code="guideline_encoding_institution" codeSystem="1.11.111.1"/><assignedPerson/><representedOrganization><name>University of British Columbia, Department of Family Practice</name></representedOrganization></assignedAuthor></author><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="last_encoded_modification" codeSystem="333"/><effectiveTime value="20060119"/></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="recommendation" codeSystem="333"/><text>Diabetes: Last A1C > 7%</text><priorityCode code="60" codeSystem="444"/><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>The target goal for A1C is 6-7%. This patient's A1C is above target. Consider discussing lifestyle, diet and therapy with the patient to better control blood sugars.</text></act></entryRelationship><entryRelationship typeCode="COMP"><act classCode="ACT" moodCode="EVN"><code code="111" codeSystem="333"/><text>The target goal for A1C is 6-7%. This patient's A1C is above target. Consider discussing lifestyle, diet and therapy with the patient to better control blood sugars.</text></act></entryRelationship></act></entryRelationship></act></entry></section></component></structuredBody></component></ClinicalDocument> +Description: Results document was sent to the external systemMon Jan 30 16:30:52 PST 2006Authoring Component: TransController +Log entry: <?xml version="1.0" encoding="UTF-8"?> +<!-- +/*********************************************************/ +/* EGADSS - Evidence-based Guideline and */ +/* Desicion Support System */ +/* */ +/* http://egadss.org */ +/* */ +/* Created on Mar 17, 2005 */ +/* */ +/* */ +/* Principal Investigator: Dr. Morgan Price */ +/* University of British Columbia */ +/* Department of Family Practice */ +/* Suite 211 - 2150 Western Parkway */ +/* Vancouver, British Columbia */ +/* Canada V6T 1V6 */ +/* */ +/* Copyright (C) 2005 University of British Columbia */ +/* */ +/* This program is free software; you can redistribute */ +/* it and/or modify it under the terms of the GNU */ +/* General Public License as published by the Free */ +/* Software Foundation; either version 2 of the License, */ +/* or (at your option) any later version. */ +/* */ +/* This program is distributed in the hope that it will */ +/* be useful, but WITHOUT ANY WARRANTY; without even */ +/* the implied warranty of MERCHANTABILITY or FITNESS */ +/* FOR A PARTICULAR PURPOSE. See the GNU General Public */ +/* License for more details. */ +/* */ +/* You should have received a copy of the GNU General */ +/* Public License along with this program; if not, */ +/* write to the Free Software Foundation, Inc., */ +/* 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ +/*********************************************************/ +--> + +<ClinicalDocument xmlns="urn:hl7-org:v3" + xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> + <id root="111" extension="01" assigningAuthorityName="EGADSS"></id> + <code code="EGADSS_01" codeSystem="222"></code> <!-- "EGADSS_01" stands for “Core Data Set\xE2\x80? --> + <effectiveTime value="20051103"/> <!--yyyymmdd --> + <author> + <time value="20041103"/><!--yyyymmdd --> + <assignedAuthor> + <id/> + <assignedAuthoringDevice> + <code code="111" codeSystem="222" codeSystemVersion="1" displayName="Some EMR"/> + + </assignedAuthoringDevice> + + </assignedAuthor> + + + </author> + <custodian> + <assignedCustodian> + <representedCustodianOrganization> + <id/> + <name>Dr. Flue Practice</name> + </representedCustodianOrganization> + </assignedCustodian> + + </custodian> + <!-- +******************************************************** +Demographics +******************************************************** +--> + <recordTarget> + <patient> + <id/> + <patientPatient> + <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"></administrativeGenderCode> + <birthTime value="19660505"/> + <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"></maritalStatusCode> + </patientPatient> + </patient> + </recordTarget> + <component> + + <structuredBody> + <!-- +******************************************************** + Active Problems section +******************************************************** +--> + <activeProblemsComponent> + <section> + <code code="11450-4" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Active Problems</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="492.8" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Emphysema"/> <!--Emphysema; ICD-9-CM --> + </observation> + + + </entry> + + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="250.x" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Diabetes"/> <!--Emphysema; ICD-9-CM --> + </observation> + + + </entry> + + </section> + </activeProblemsComponent> + + <!-- +******************************************************** + Past Medical History section +******************************************************** +--> + <pastMedicalHisotryComponent> + <section> + <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Past Medical History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="696.1" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Psoriasis"></code> + </observation> + + + </entry> + </section> + </pastMedicalHisotryComponent> + <!-- +******************************************************** + Surgical History section +******************************************************** +--> + <surgicalHisotryComponent> + <section> + <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Surgical History</title> + <entry> + + <procedure classCode="PROC" moodCode="EVN"> + <code code="47.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Appendectomy"></code> <!--Appendectomy; ICD-9-CM --> + </procedure> + + </entry> + </section> + </surgicalHisotryComponent> + <!-- +******************************************************** + Medications section +******************************************************** +--> + <medicationsComponent> + <section> + <code code="19789-7" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Medications</title> + <entry> + + <substanceAdministration classCode="ActClass" moodCode="EVN"> + <consumable> + <manufacturedProduct> + <manufacturedLabeledDrug> + <code code="00789798" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Acetaminophen 350 Mg"/> <!--Acetaminophen 350 Mg --> + </manufacturedLabeledDrug> + </manufacturedProduct> + </consumable> + </substanceAdministration> + + </entry> + <entry> + + <substanceAdministration classCode="ENTRY" moodCode="EVN"> + <consumable> + <manufacturedProduct> + <manufacturedLabeledDrug> + <code code="02239757" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Bactroban"/> <!--Bactroban --> + </manufacturedLabeledDrug> + </manufacturedProduct> + </consumable> + </substanceAdministration> + + </entry> + + + </section> + </medicationsComponent> + <!-- +******************************************************** + Allergies and Adverse Reactions section +******************************************************** +--> + <allergiesComponent> + <section> + <code code="10123-x" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Allergies and Adverse Reactions</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="271.3" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Lactose Intolerance"></code> <!--Lactose Intolerance ICD-9-CM --> + </observation> + + </entry> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V15.01" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Allergy to peanuts"></code> <!--Allergy to peanuts ICD-9-CM --> + </observation> + + </entry> + + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V14.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of allergy to penecilin"></code> <!--History of allergy to penicillin ICD-9-CM --> + </observation> + + + </entry> + + </section> + </allergiesComponent> + <!-- +******************************************************** + Family History section +******************************************************** +--> + <familyHistoryComponent> + <section> + <code code="10157-6" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Family History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V180" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Family Hx-Diabetes Mellitus"></code> <!--Family Hx-Diabetes Mellitus ICD-9-CM --> + </observation> + + </entry> + </section> + </familyHistoryComponent> + <!-- +******************************************************** + Immunizations section +******************************************************** +--> + + <immunizationsComponent> + <section> + <code code="11369-6" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Immunizations</title> + <entry> + + <procedure classCode="PROC" moodCode="EVN"> + <code code="Td" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Tetanus, Diphtheria-adult"></code> <!-- Tetanus, Diphtheria - adult BCCDC --> + <effectiveTime value="19820514"/> + </procedure> + + + </entry> + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="YF" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Yellow Fever"></code><!-- Yellow Fever BCCDC --> + <effectiveTime value="20041104"></effectiveTime> + + </procedure> + </entry> + + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="PNEU-C-7" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Pneumococcal Conjugate C-7"></code><!-- Pneumococcal Conjugate C-7 --> + <effectiveTime value="19660511"></effectiveTime> + + </procedure> + </entry> + + <!-- + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="MMR" codeSystemName="BCCDC"></code> Measles Mumps Rubella + <effectiveTime value="19660511"></effectiveTime> + + </procedure> + </entry> + --> + + + </section> + </immunizationsComponent> + <!-- +******************************************************** + Social History section +******************************************************** +--> + <socialHistoryComponent> + <section> + <code code="29762-2" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Social History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V1582" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of tobacco use"></code> <!--History of tobacco use ICD-9-CM --> + + </observation> + </entry> + + </section> + + </socialHistoryComponent> + + <!-- +******************************************************** + Labs section +******************************************************** +--> + <labsComponent> + <section> + <code code="11502-2" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="Labs"/> + <title>Labs</title> + <entry> + <observation classCode="OBS" moodCode="EVN"> + <code code="4548-4" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="A1C Test"/> + <effectiveTime value="20051108"/> + <value xsi:type="PQ" value="8" unit="%"/> + </observation> + </entry> + </section> + </labsComponent> + + + + </structuredBody> + + </component> +</ClinicalDocument> + +Description: Patient Summary document was received from the external systemMon Jan 30 16:40:54 PST 2006Authoring Component: TransController +Log entry: <?xml version="1.0" encoding="UTF-8"?> +<!-- +/*********************************************************/ +/* EGADSS - Evidence-based Guideline and */ +/* Desicion Support System */ +/* */ +/* http://egadss.org */ +/* */ +/* Created on Mar 17, 2005 */ +/* */ +/* */ +/* Principal Investigator: Dr. Morgan Price */ +/* University of British Columbia */ +/* Department of Family Practice */ +/* Suite 211 - 2150 Western Parkway */ +/* Vancouver, British Columbia */ +/* Canada V6T 1V6 */ +/* */ +/* Copyright (C) 2005 University of British Columbia */ +/* */ +/* This program is free software; you can redistribute */ +/* it and/or modify it under the terms of the GNU */ +/* General Public License as published by the Free */ +/* Software Foundation; either version 2 of the License, */ +/* or (at your option) any later version. */ +/* */ +/* This program is distributed in the hope that it will */ +/* be useful, but WITHOUT ANY WARRANTY; without even */ +/* the implied warranty of MERCHANTABILITY or FITNESS */ +/* FOR A PARTICULAR PURPOSE. See the GNU General Public */ +/* License for more details. */ +/* */ +/* You should have received a copy of the GNU General */ +/* Public License along with this program; if not, */ +/* write to the Free Software Foundation, Inc., */ +/* 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ +/*********************************************************/ +--> + +<ClinicalDocument xmlns="urn:hl7-org:v3" + xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> + <id root="111" extension="01" assigningAuthorityName="EGADSS"></id> + <code code="EGADSS_01" codeSystem="222"></code> <!-- "EGADSS_01" stands for “Core Data Set\xE2\x80? --> + <effectiveTime value="20051103"/> <!--yyyymmdd --> + <author> + <time value="20041103"/><!--yyyymmdd --> + <assignedAuthor> + <id/> + <assignedAuthoringDevice> + <code code="111" codeSystem="222" codeSystemVersion="1" displayName="Some EMR"/> + + </assignedAuthoringDevice> + + </assignedAuthor> + + + </author> + <custodian> + <assignedCustodian> + <representedCustodianOrganization> + <id/> + <name>Dr. Flue Practice</name> + </representedCustodianOrganization> + </assignedCustodian> + + </custodian> + <!-- +******************************************************** +Demographics +******************************************************** +--> + <recordTarget> + <patient> + <id/> + <patientPatient> + <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"></administrativeGenderCode> + <birthTime value="19660505"/> + <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"></maritalStatusCode> + </patientPatient> + </patient> + </recordTarget> + <component> + + <structuredBody> + <!-- +******************************************************** + Active Problems section +******************************************************** +--> + <activeProblemsComponent> + <section> + <code code="11450-4" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Active Problems</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="492.8" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Emphysema"/> <!--Emphysema; ICD-9-CM --> + </observation> + + + </entry> + + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="250.x" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Diabetes"/> <!--Emphysema; ICD-9-CM --> + </observation> + + + </entry> + + </section> + </activeProblemsComponent> + + <!-- +******************************************************** + Past Medical History section +******************************************************** +--> + <pastMedicalHisotryComponent> + <section> + <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Past Medical History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="696.1" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Psoriasis"></code> + </observation> + + + </entry> + </section> + </pastMedicalHisotryComponent> + <!-- +******************************************************** + Surgical History section +******************************************************** +--> + <surgicalHisotryComponent> + <section> + <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Surgical History</title> + <entry> + + <procedure classCode="PROC" moodCode="EVN"> + <code code="47.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Appendectomy"></code> <!--Appendectomy; ICD-9-CM --> + </procedure> + + </entry> + </section> + </surgicalHisotryComponent> + <!-- +******************************************************** + Medications section +******************************************************** +--> + <medicationsComponent> + <section> + <code code="19789-7" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Medications</title> + <entry> + + <substanceAdministration classCode="ActClass" moodCode="EVN"> + <consumable> + <manufacturedProduct> + <manufacturedLabeledDrug> + <code code="00789798" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Acetaminophen 350 Mg"/> <!--Acetaminophen 350 Mg --> + </manufacturedLabeledDrug> + </manufacturedProduct> + </consumable> + </substanceAdministration> + + </entry> + <entry> + + <substanceAdministration classCode="ENTRY" moodCode="EVN"> + <consumable> + <manufacturedProduct> + <manufacturedLabeledDrug> + <code code="02239757" codeSystem="HealthCanadaDrugProductDatabase" codeSystemName="HealthCanadaDrugProductDatabase" displayName="Bactroban"/> <!--Bactroban --> + </manufacturedLabeledDrug> + </manufacturedProduct> + </consumable> + </substanceAdministration> + + </entry> + + + </section> + </medicationsComponent> + <!-- +******************************************************** + Allergies and Adverse Reactions section +******************************************************** +--> + <allergiesComponent> + <section> + <code code="10123-x" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Allergies and Adverse Reactions</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="271.3" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Lactose Intolerance"></code> <!--Lactose Intolerance ICD-9-CM --> + </observation> + + </entry> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V15.01" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Allergy to peanuts"></code> <!--Allergy to peanuts ICD-9-CM --> + </observation> + + </entry> + + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V14.0" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of allergy to penecilin"></code> <!--History of allergy to penicillin ICD-9-CM --> + </observation> + + + </entry> + + </section> + </allergiesComponent> + <!-- +******************************************************** + Family History section +******************************************************** +--> + <familyHistoryComponent> + <section> + <code code="10157-6" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Family History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V180" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="Family Hx-Diabetes Mellitus"></code> <!--Family Hx-Diabetes Mellitus ICD-9-CM --> + </observation> + + </entry> + </section> + </familyHistoryComponent> + <!-- +******************************************************** + Immunizations section +******************************************************** +--> + + <immunizationsComponent> + <section> + <code code="11369-6" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Immunizations</title> + <entry> + + <procedure classCode="PROC" moodCode="EVN"> + <code code="Td" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Tetanus, Diphtheria-adult"></code> <!-- Tetanus, Diphtheria - adult BCCDC --> + <effectiveTime value="19820514"/> + </procedure> + + + </entry> + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="YF" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Yellow Fever"></code><!-- Yellow Fever BCCDC --> + <effectiveTime value="20041104"></effectiveTime> + + </procedure> + </entry> + + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="PNEU-C-7" codeSystem="BCCDC" codeSystemName="BCCDC" displayName="Pneumococcal Conjugate C-7"></code><!-- Pneumococcal Conjugate C-7 --> + <effectiveTime value="19660511"></effectiveTime> + + </procedure> + </entry> + + <!-- + <entry> + <procedure classCode="PROC" moodCode="EVN"> + <code code="MMR" codeSystemName="BCCDC"></code> Measles Mumps Rubella + <effectiveTime value="19660511"></effectiveTime> + + </procedure> + </entry> + --> + + + </section> + </immunizationsComponent> + <!-- +******************************************************** + Social History section +******************************************************** +--> + <socialHistoryComponent> + <section> + <code code="29762-2" codeSystem="2.16.840.1.113883.6.1"></code> + <title>Social History</title> + <entry> + + <observation classCode="OBS" moodCode="EVN"> + <code code="V1582" codeSystem="2.16.840.1.113883.6.2" codeSystemName="ICD-9-CM" displayName="History of tobacco use"></code> <!--History of tobacco use ICD-9-CM --> + + </observation> + </entry> + + </section> + + </socialHistoryComponent> + + <!-- +******************************************************** + Labs section +******************************************************** +--> + <labsComponent> + <section> + <code code="11502-2" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="Labs"/> + <title>Labs</title> + <entry> + <observation classCode="OBS" moodCode="EVN"> + <code code="4548-4" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="A1C Test"/> + <effectiveTime value="20051108"/> + <value xsi:type="PQ" value="8" unit="%"/> + </observation> + </entry> + </section> + </labsComponent> + + + + </structuredBody> + + </component> +</ClinicalDocument> + +Description: Patient Summary document was received from the external systemMon Jan 30 16:42:13 PST 2006Authoring Component: TransController +Log entry: <?xml version="1.0" encoding="UTF-8"?> +<!-- +/*********************************************************/ +/* EGADSS - Evidence-based Guideline and */ +/* Desicion Support System */ +/* */ +/* http://egadss.org */ +/* */ +/* Created on Mar 17, 2005 */ +/* */ +/* */ +/* Principal Investigator: Dr. Morgan Price */ +/* University of British Columbia */ +/* Department of Family Practice */ +/* Suite 211 - 2150 Western Parkway */ +/* Vancouver, British Columbia */ +/* Canada V6T 1V6 */ +/* */ +/* Copyright (C) 2005 University of British Columbia */ +/* */ +/* This program is free software; you can redistribute */ +/* it and/or modify it under the terms of the GNU */ +/* General Public License as published by the Free */ +/* Software Foundation; either version 2 of the License, */ +/* or (at your option) any later version. */ +/* */ +/* This program is distributed in the hope that it will */ +/* be useful, but WITHOUT ANY WARRANTY; without even */ +/* the implied warranty of MERCHANTABILITY or FITNESS */ +/* FOR A PARTICULAR PURPOSE. See the GNU General Public */ +/* License for more details. */ +/* */ +/* You should have received a copy of the GNU General */ +/* Public License along with this program; if not, */ +/* write to the Free Software Foundation, Inc., */ +/* 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ +/*********************************************************/ +--> + +<ClinicalDocument xmlns="urn:hl7-org:v3" + xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> + <id root="111" extension="01" assigningAuthorityName="EGADSS"></id> + <code code="EGADSS_01" codeSystem="222"></code> <!-- "EGADSS_01" stands for “Core Data Set\xE2\x80? --> + <effectiveTime value="20051103"/> <!--yyyymmdd --> + <author> + <time value="20041103"/><!--yyyymmdd --> + <assignedAuthor> + <id/> + <assignedAuthoringDevice> + <code code="111" codeSystem="222" codeSystemVersion="1" displayName="Some EMR"/> + + </assignedAuthoringDevice> + + </assignedAuthor> + + + </author> + <custodian> + <assignedCustodian> + <representedCustodianOrganization> + <id/> + <name>Dr. Flue Practice</name> + </representedCustodianOrganization> + </assignedCustodian> + + </custodian> + <!-- +******************************************************** +Demographics +******************************************************** +--> + <recordTarget> + <patient> + <id/> + <patientPatient> + <administrativeGenderCode code="M" codeSystem="2.16.840.1.113883.5.1"></administrativeGenderCode> + <birthTime value="19660505"/> + <maritalStatusCode code="S" codeSystem="2.16.840.1.113883.5.2"></maritalStatusCode> + </patientP... 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From: <mc...@us...> - 2006-05-05 18:07:37
|
Revision: 356 Author: mcglen Date: 2006-05-05 11:07:30 -0700 (Fri, 05 May 2006) ViewCVS: http://svn.sourceforge.net/egadss/?rev=356&view=rev Log Message: ----------- Fixing Hisotry spelling mistake. Modified Paths: -------------- trunk/egadss/egadss_dev/auxiliaryResources/PatientSummary.xsd trunk/egadss/egadss_dev/auxiliaryResources/patientSummaryStyleSh.xsl Modified: trunk/egadss/egadss_dev/auxiliaryResources/PatientSummary.xsd =================================================================== --- trunk/egadss/egadss_dev/auxiliaryResources/PatientSummary.xsd 2006-05-05 15:34:55 UTC (rev 355) +++ trunk/egadss/egadss_dev/auxiliaryResources/PatientSummary.xsd 2006-05-05 18:07:30 UTC (rev 356) @@ -205,8 +205,8 @@ <xs:element name="activeProblemsComponent" type="EGADSS.ActiveProblemsComponent3"/> - <xs:element name="pastMedicalHisotryComponent" type="EGADSS.PastMedicalHistoryComponent3"/> - <xs:element name="surgicalHisotryComponent" type="EGADSS.SurgicalHistoryComponent3"/> + <xs:element name="pastMedicalHistoryComponent" type="EGADSS.PastMedicalHistoryComponent3"/> + <xs:element name="surgicalHistoryComponent" type="EGADSS.SurgicalHistoryComponent3"/> <xs:element name="medicationsComponent" type="EGADSS.MedicationsComponent3"/> <xs:element name="allergiesComponent" type="EGADSS.AllergiesAndAdverseReactionsComponent3"/> <xs:element name="familyHistoryComponent" type="EGADSS.FamilyHistoryComponent3"/> Modified: trunk/egadss/egadss_dev/auxiliaryResources/patientSummaryStyleSh.xsl =================================================================== --- trunk/egadss/egadss_dev/auxiliaryResources/patientSummaryStyleSh.xsl 2006-05-05 15:34:55 UTC (rev 355) +++ trunk/egadss/egadss_dev/auxiliaryResources/patientSummaryStyleSh.xsl 2006-05-05 18:07:30 UTC (rev 356) @@ -220,8 +220,8 @@ <xsl:template match="n1:component/n1:structuredBody"> <xsl:apply-templates select="n1:activeProblemsComponent/n1:section"/> - <xsl:apply-templates select="n1:pastMedicalHisotryComponent/n1:section"/> - <xsl:apply-templates select="n1:surgicalHisotryComponent/n1:section"/> + <xsl:apply-templates select="n1:pastMedicalHistoryComponent/n1:section"/> + <xsl:apply-templates select="n1:surgicalHistoryComponent/n1:section"/> <xsl:apply-templates select="n1:medicationsComponent/n1:section"/> <xsl:apply-templates select="n1:allergiesComponent/n1:section"/> <xsl:apply-templates select="n1:familyHistoryComponent/n1:section"/> @@ -261,7 +261,7 @@ </xsl:template> <!-- Past Medical History --> - <xsl:template match="n1:pastMedicalHisotryComponent/n1:section"> + <xsl:template match="n1:pastMedicalHistoryComponent/n1:section"> <b> <xsl:text>Past Medical History: </xsl:text></b> <xsl:for-each select="n1:entry"> <li> @@ -289,7 +289,7 @@ </xsl:template> <!-- Surgical History --> - <xsl:template match="n1:surgicalHisotryComponent/n1:section"> + <xsl:template match="n1:surgicalHistoryComponent/n1:section"> <b> <xsl:text>Surgical History: </xsl:text></b> <xsl:for-each select="n1:entry"> <li> This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2006-05-05 15:35:10
|
Revision: 355 Author: mcglen Date: 2006-05-05 08:34:55 -0700 (Fri, 05 May 2006) ViewCVS: http://svn.sourceforge.net/egadss/?rev=355&view=rev Log Message: ----------- Fixed "History" spelling mistake in test patient files. Modified Paths: -------------- trunk/egadss/egadss_dev/auxiliaryResources/TestPatient1ForTranslationAdvanced.xml trunk/egadss/egadss_dev/auxiliaryResources/TestPatientX.xml trunk/egadss/egadss_dev/auxiliaryResources/TestPatientY.xml trunk/egadss/egadss_dev/auxiliaryResources/TestPatientZ.xml Modified: trunk/egadss/egadss_dev/auxiliaryResources/TestPatient1ForTranslationAdvanced.xml =================================================================== --- trunk/egadss/egadss_dev/auxiliaryResources/TestPatient1ForTranslationAdvanced.xml 2006-04-29 00:17:03 UTC (rev 354) +++ trunk/egadss/egadss_dev/auxiliaryResources/TestPatient1ForTranslationAdvanced.xml 2006-05-05 15:34:55 UTC (rev 355) @@ -117,7 +117,7 @@ Past Medical History section ******************************************************** --> - <pastMedicalHisotryComponent> + <pastMedicalHistoryComponent> <section> <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> <title>Past Medical History</title> @@ -130,13 +130,13 @@ </entry> </section> - </pastMedicalHisotryComponent> + </pastMedicalHistoryComponent> <!-- ******************************************************** Surgical History section ******************************************************** --> - <surgicalHisotryComponent> + <surgicalHistoryComponent> <section> <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> <title>Surgical History</title> @@ -148,7 +148,7 @@ </entry> </section> - </surgicalHisotryComponent> + </surgicalHistoryComponent> <!-- ******************************************************** Medications section Modified: trunk/egadss/egadss_dev/auxiliaryResources/TestPatientX.xml =================================================================== --- trunk/egadss/egadss_dev/auxiliaryResources/TestPatientX.xml 2006-04-29 00:17:03 UTC (rev 354) +++ trunk/egadss/egadss_dev/auxiliaryResources/TestPatientX.xml 2006-05-05 15:34:55 UTC (rev 355) @@ -117,7 +117,7 @@ Past Medical History section ******************************************************** --> - <pastMedicalHisotryComponent> + <pastMedicalHistoryComponent> <section> <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> <title>Past Medical History</title> @@ -130,13 +130,13 @@ </entry> </section> - </pastMedicalHisotryComponent> + </pastMedicalHistoryComponent> <!-- ******************************************************** Surgical History section ******************************************************** --> - <surgicalHisotryComponent> + <surgicalHistoryComponent> <section> <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> <title>Surgical History</title> @@ -148,7 +148,7 @@ </entry> </section> - </surgicalHisotryComponent> + </surgicalHistoryComponent> <!-- ******************************************************** Medications section Modified: trunk/egadss/egadss_dev/auxiliaryResources/TestPatientY.xml =================================================================== --- trunk/egadss/egadss_dev/auxiliaryResources/TestPatientY.xml 2006-04-29 00:17:03 UTC (rev 354) +++ trunk/egadss/egadss_dev/auxiliaryResources/TestPatientY.xml 2006-05-05 15:34:55 UTC (rev 355) @@ -117,7 +117,7 @@ Past Medical History section ******************************************************** --> - <pastMedicalHisotryComponent> + <pastMedicalHistoryComponent> <section> <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> <title>Past Medical History</title> @@ -130,13 +130,13 @@ </entry> </section> - </pastMedicalHisotryComponent> + </pastMedicalHistoryComponent> <!-- ******************************************************** Surgical History section ******************************************************** --> - <surgicalHisotryComponent> + <surgicalHistoryComponent> <section> <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> <title>Surgical History</title> @@ -148,7 +148,7 @@ </entry> </section> - </surgicalHisotryComponent> + </surgicalHistoryComponent> <!-- ******************************************************** Medications section Modified: trunk/egadss/egadss_dev/auxiliaryResources/TestPatientZ.xml =================================================================== --- trunk/egadss/egadss_dev/auxiliaryResources/TestPatientZ.xml 2006-04-29 00:17:03 UTC (rev 354) +++ trunk/egadss/egadss_dev/auxiliaryResources/TestPatientZ.xml 2006-05-05 15:34:55 UTC (rev 355) @@ -117,7 +117,7 @@ Past Medical History section ******************************************************** --> - <pastMedicalHisotryComponent> + <pastMedicalHistoryComponent> <section> <code code="11348-0" codeSystem="2.16.840.1.113883.6.1"></code> <title>Past Medical History</title> @@ -130,13 +130,13 @@ </entry> </section> - </pastMedicalHisotryComponent> + </pastMedicalHistoryComponent> <!-- ******************************************************** Surgical History section ******************************************************** --> - <surgicalHisotryComponent> + <surgicalHistoryComponent> <section> <code code="10167-5" codeSystem="2.16.840.1.113883.6.1"></code> <title>Surgical History</title> @@ -148,7 +148,7 @@ </entry> </section> - </surgicalHisotryComponent> + </surgicalHistoryComponent> <!-- ******************************************************** Medications section This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2006-04-29 00:17:12
|
Revision: 354 Author: mcglen Date: 2006-04-28 17:17:03 -0700 (Fri, 28 Apr 2006) ViewCVS: http://svn.sourceforge.net/egadss/?rev=354&view=rev Log Message: ----------- Paying off Debt Modified Paths: -------------- trunk/egadss/egadss_dev/src/org/egadss/IKnowledgeMgt.java trunk/egadss/egadss_dev/src/org/egadss/configmanager/ConfigManager.java trunk/egadss/egadss_dev/src/org/egadss/docimpex/DocImpEx.java trunk/egadss/egadss_dev/src/org/egadss/glcompiler/GLCompiler.java trunk/egadss/egadss_dev/src/org/egadss/inferenceengine/InferenceEngine.java trunk/egadss/egadss_dev/src/org/egadss/knowledgemanager/KnowledgeManager.java trunk/egadss/egadss_dev/src/org/egadss/transcontroller/TransController.java Modified: trunk/egadss/egadss_dev/src/org/egadss/IKnowledgeMgt.java =================================================================== --- trunk/egadss/egadss_dev/src/org/egadss/IKnowledgeMgt.java 2006-04-07 21:48:01 UTC (rev 353) +++ trunk/egadss/egadss_dev/src/org/egadss/IKnowledgeMgt.java 2006-04-29 00:17:03 UTC (rev 354) @@ -44,8 +44,6 @@ * @author mcglen * @version $Revision$ * - * TODO To change the template for this generated type comment go to Window - - * Preferences - Java - Code Style - Code Templates */ public interface IKnowledgeMgt { @@ -67,9 +65,6 @@ public void loadKnowledgeModule(File knowledgeModuleMLMs, String knowledgeModuleName) throws EgadssException; - // public void loadKnowledgeModule (File knowledgeModuleMLMs, File - // knowledgeModuleCLP, String knowledgeModuleName) throws EgadssException; - /** * This method loads a knowledge module that is predefined to be the default * module or one of the default modules (the list of default modules is Modified: trunk/egadss/egadss_dev/src/org/egadss/configmanager/ConfigManager.java =================================================================== --- trunk/egadss/egadss_dev/src/org/egadss/configmanager/ConfigManager.java 2006-04-07 21:48:01 UTC (rev 353) +++ trunk/egadss/egadss_dev/src/org/egadss/configmanager/ConfigManager.java 2006-04-29 00:17:03 UTC (rev 354) @@ -36,30 +36,36 @@ /*********************************************************/ package org.egadss.configmanager; -// import classes -import java.io.*; -import java.util.*; +import java.io.IOException; +import java.util.Enumeration; +import java.util.HashMap; +import java.util.IdentityHashMap; +import java.util.Iterator; +import java.util.logging.FileHandler; import java.util.logging.Level; +import java.util.logging.LogManager; import java.util.logging.Logger; +import java.util.logging.SimpleFormatter; -import javax.xml.parsers.*; -import javax.xml.transform.*; -import javax.xml.transform.stream.*; -import javax.xml.xpath.*; - -import org.egadss.*; -import org.egadss.docimpex.*; -import org.egadss.datastorage.*; -import org.egadss.glcompiler.*; -import org.egadss.inferenceengine.*; +import org.egadss.IAudit; +import org.egadss.IKnowledgeMgt; +import org.egadss.ISysConfig; +import org.egadss.ITrans; +import org.egadss.datastorage.DataStorage; +import org.egadss.datastorage.IDataAccess; +import org.egadss.docimpex.DocImpEx; +import org.egadss.docimpex.IDocumentExport; +import org.egadss.docimpex.IDocumentImport; +import org.egadss.glcompiler.GLCompiler; +import org.egadss.glcompiler.IKnowledgeImport; +import org.egadss.inferenceengine.IInference; +import org.egadss.inferenceengine.InferenceEngine; import org.egadss.knowledgemanager.KnowledgeManager; import org.egadss.transcontroller.TransController; -import org.egadss.util.*; +import org.egadss.util.EgadssException; +import org.egadss.util.IConfig; +import org.egadss.util.LogEntry; -import org.w3c.dom.*; -import org.xml.sax.SAXException; -import java.util.logging.*; - /** * ConfigManager component is responsible for the system's configuration and * auditing of operations. @@ -69,105 +75,10 @@ */ public class ConfigManager implements IAuditLog, ISysConfig, IConfig, IAudit { - // variables - - /** TransactionController instance refered to by the ITrans interface. */ - private String auditingMode = null; - - /** TransactionController instance refered to by the ITrans interface. */ - private ITrans iTrans = null; - - /** TransactionController instance refered to by the IConfig interface.. */ - private IConfig iConfigTransController = null; - - /** DocImpEx instance refered to by the IDocumentImport interface. */ - private IDocumentImport iDocumentImport = null; - - /** DocImpEx instance refered to by the IDocumentExport interface. */ - private IDocumentExport iDocumentExport = null; - - /** DocImpEx instance refered to by the IConfig interface. */ - private IConfig iConfigDocImpEx = null; - - /** InferenceEngine instance refered to by the IInference interface. */ - private IInference iInference = null; - - /** InferenceEngine instance refered to by the IConfig interface. */ - private IConfig iConfigInferenceEngine = null; - - /** KnowledgeManager instance refered to by the IKnowledgeMgt interface. */ - private IKnowledgeMgt iKnowledgeMgt = null; - - /** KnowledgeManager instance refered to by the IConfig interface. */ - private IConfig iConfigKnowledgeManager = null; - - /** GLCompiler instance refered to by the IKnowledgeImport interface. */ - private IKnowledgeImport iKnowledgeImport = null; - - /** GLCompiler instance refered to by the IConfig interface. */ - private IConfig iConfigGLCompiler = null; - - /** DataStorage instance refered to by the IDataAccess interface. */ + private String auditingMode = null; // auditing level E.g. "full" private IDataAccess iDataAccess = null; - - /** DataStorage instance refered to by the IConfig interface. */ - private IConfig iConfigDataStorage = null; - + /** - * IdentityHashMap containing reference to components referenced by the - * ConfigManager component. - */ - private IdentityHashMap configManagerCompMap; - - /** - * IdentityHashMap containing reference to components referenced by the - * TransactionController component. - */ - private IdentityHashMap transControllerCompMap; - - /** - * IdentityHashMap containing reference to components referenced by the - * DocImpEx component. - */ - private IdentityHashMap docImpExCompMap; - - /** - * IdentityHashMap containing reference to components referenced by the - * iInferenceEngine component. - */ - private IdentityHashMap inferenceEngineCompMap; - - /** - * IdentityHashMap containing reference to components referenced by the - * KnowledgeManager component. - */ - private IdentityHashMap knowledgeManagerComMap; - - /** - * IdentityHashMap containing reference to components referenced by the - * GlCompiler component. - */ - private IdentityHashMap glCompilerComMap; - - /** - * IdentityHashMap containing reference to components referenced by the - * DataStorage component. - */ - private IdentityHashMap dataStorageComMap; - - /** Message for the EgadssException object. */ - private String exceptionMessage = null; - - /** XML file that contains configuration information for the overall system. */ - private File configFile = null; - - /** - * Uri of the XML file that contains configuration information for the - * overall system. - */ - private String configFileUri = null; - - /** * An instance of the Configuration class that holds configuration * information for the overall system */ @@ -217,8 +128,7 @@ /** Creates and initializes instances of other EGADSS components. */ private void startSystem() throws Exception { try { - this.createComponents(); - + this.initializeComponents(); log.info("EGADSS SYSTEM HAS BEEN STARTED"); @@ -228,75 +138,30 @@ } - /** - * Creates instances of other EGADSS components and refers to them by - * interfaces. - */ - private void createComponents() throws Exception { - - try { - // create an instance of TransController - // refer to the instance of TransController by interfaces - iTrans = new TransController(); - iConfigTransController = (IConfig) iTrans; - - // create an instance of DocImpEx - // refer to the instance of DocImpEx by interfaces - iDocumentImport = new DocImpEx(); - iDocumentExport = (IDocumentExport) iDocumentImport; - iConfigDocImpEx = (IConfig) iDocumentImport; - - // create an instance of DataStorage - iDataAccess = new DataStorage(); - iConfigDataStorage = (IConfig) iDataAccess; - - // create an instance of iInferenceEngine - iInference = new InferenceEngine(); - iConfigInferenceEngine = (IConfig) iInference; - - // create an instance of KnowledgeManager - iKnowledgeMgt = new KnowledgeManager(); - iConfigKnowledgeManager = (IConfig) iKnowledgeMgt; - - // create an instance of GlCompiler - iKnowledgeImport = new GLCompiler(); - iConfigGLCompiler = (IConfig) iKnowledgeImport; - } catch (Exception e) { - throw e; - } - - } - /** Initializes instances of other EGADSS components. */ private void initializeComponents() throws Exception { - - // initialize this (ConfigManager) - try { - configManagerCompMap = new IdentityHashMap(); - // in the Paperchild prototype, the configManagerCompMap is empty - } catch (Exception e) { - throw e; - - } - - try { - this.initialize(configManagerCompMap); - } catch (Exception e) { - throw e; - } - + IConfig iTrans = new TransController(); + IConfig iDocImpEx = new DocImpEx(); + IConfig iInference = new InferenceEngine(); + IConfig iKnowledgeMgt = new KnowledgeManager(); + IConfig iKnowledgeImport = new GLCompiler(); + +// create an instance of DataStorage + iDataAccess = new DataStorage(); + // initialize TransController - try { + try { + // create and initialize the transControllerCompMap - transControllerCompMap = new IdentityHashMap(); - transControllerCompMap.put("IDocumentImport", iDocumentImport); - transControllerCompMap.put("IDocumentExport", iDocumentExport); + IdentityHashMap transControllerCompMap = new IdentityHashMap(); + transControllerCompMap.put("IDocumentImport", iDocImpEx); + transControllerCompMap.put("IDocumentExport", iDocImpEx); transControllerCompMap.put("IInference", iInference); transControllerCompMap.put("IAuditLog", this); - iConfigTransController.initialize(transControllerCompMap); + iTrans.initialize(transControllerCompMap); } catch (Exception e) { - log.log(Level.SEVERE, "Failure to initialize TransController. " + log.log(Level.SEVERE, "Failure to initialize TransController." + e.getMessage(), e); throw e; @@ -305,10 +170,10 @@ // initialize DocImpEx try { // create and initialize the docImpExCompMap - docImpExCompMap = new IdentityHashMap(); + IdentityHashMap docImpExCompMap = new IdentityHashMap(); docImpExCompMap.put(this, "IAuditLog"); - iConfigDocImpEx.initialize(docImpExCompMap); + (iDocImpEx).initialize(docImpExCompMap); } catch (Exception e) { log.log(Level.SEVERE, "Failure to initialize DocImpEx. " + e.getMessage(), e); @@ -318,10 +183,10 @@ // initialize InferenceEngine try { // create and initialize the inferenceEngineCompMap - inferenceEngineCompMap = new IdentityHashMap(); + IdentityHashMap inferenceEngineCompMap = new IdentityHashMap(); inferenceEngineCompMap.put("IAuditLog", this); - iConfigInferenceEngine.initialize(inferenceEngineCompMap); + ((IConfig)iInference).initialize(inferenceEngineCompMap); } catch (Exception e) { log.log(Level.SEVERE, "Failure to initialize InferenceEngine. " + e.getMessage(), e); @@ -331,13 +196,13 @@ // initialize KnowledgeManager try { // create and initialize the knowledgeManagerComMap - knowledgeManagerComMap = new IdentityHashMap(); + IdentityHashMap knowledgeManagerComMap = new IdentityHashMap(); knowledgeManagerComMap.put("IInference", iInference); knowledgeManagerComMap.put("IKnowledgeImport", iKnowledgeImport); knowledgeManagerComMap.put("IDataAccess", iDataAccess); knowledgeManagerComMap.put("IAuditLog", this); - iConfigKnowledgeManager.initialize(knowledgeManagerComMap); + ((IConfig)iKnowledgeMgt).initialize(knowledgeManagerComMap); } catch (Exception e) { log.log(Level.SEVERE, "Failure to initialize KnowledgeManager. " + e.getMessage(), e); @@ -347,10 +212,10 @@ // initialize GlCompiler try { // create and initialize the glCompilerComMap - glCompilerComMap = new IdentityHashMap(); + IdentityHashMap glCompilerComMap = new IdentityHashMap(); glCompilerComMap.put("IAuditLog", this); - iConfigGLCompiler.initialize(glCompilerComMap); + ((IConfig)iKnowledgeImport).initialize(glCompilerComMap); } catch (Exception e) { log.log(Level.SEVERE, "Failure to initialize GlCompiler. " + e.getMessage(), e); @@ -360,10 +225,10 @@ // initialize DataStorage try { // create and initialize the dataStorageComMap - dataStorageComMap = new IdentityHashMap(); + IdentityHashMap dataStorageComMap = new IdentityHashMap(); dataStorageComMap.put("IAuditLog", this); - iConfigDataStorage.initialize(dataStorageComMap); + ((IConfig)iDataAccess).initialize(dataStorageComMap); } catch (Exception e) { log.log(Level.SEVERE, "Failure to initialize DataStorage. " + e.getMessage(), e); @@ -389,7 +254,7 @@ try { iDataAccess.writeLogEntry(logEntry); } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (writeLogEntry method): " + String exceptionMessage = "ConfigManager Exception (writeLogEntry method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -402,33 +267,17 @@ } } - // ISysConfig methods - + public void shutSystemDown() throws EgadssException { try { - // terminate the instance of iTrans - iConfigTransController.terminate(); - - // terminate the instance of DocImpEx - iConfigDocImpEx.terminate(); - - // terminate the instance of iInferenceEngine - iConfigInferenceEngine.terminate(); - - // terminate the instance of KnowledgeManager - iConfigKnowledgeManager.terminate(); - - // terminate the instance of GlCompiler - iConfigGLCompiler.terminate(); - // terminate the instance of DataStorage - iConfigDataStorage.terminate(); + ((IConfig)iDataAccess).terminate(); // terminate the current instance of ConfigManager this.terminate(); } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (shutSystemDown method): " + String exceptionMessage = "ConfigManager Exception (shutSystemDown method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -450,15 +299,9 @@ try { configStr = this.getInfo(); - configStr = configStr + iConfigTransController.getInfo(); - configStr = configStr + iConfigDocImpEx.getInfo(); - configStr = configStr + iConfigDataStorage.getInfo(); - configStr = configStr + iConfigInferenceEngine.getInfo(); - configStr = configStr + iConfigKnowledgeManager.getInfo(); - configStr = configStr + iConfigGLCompiler.getInfo(); } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (viewSystemConfig method): " + String exceptionMessage = "ConfigManager Exception (viewSystemConfig method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -498,7 +341,7 @@ i++; } } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (generateAuditReport method): " + String exceptionMessage = "ConfigManager Exception (generateAuditReport method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -516,7 +359,7 @@ try { this.auditingMode = auditingMode; } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (setAuditingMode method): " + String exceptionMessage = "ConfigManager Exception (setAuditingMode method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -533,7 +376,7 @@ try { auditingMode = this.auditingMode; } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (getAuditingMode method): " + String exceptionMessage = "ConfigManager Exception (getAuditingMode method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -555,7 +398,7 @@ try { this.setAuditingMode("full"); } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (initialize method): " + String exceptionMessage = "ConfigManager Exception (initialize method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -570,34 +413,9 @@ public void terminate() throws EgadssException { try { - ITrans iTrans = null; - - iConfigTransController = null; - - iDocumentImport = null; - - iDocumentExport = null; - - iConfigDocImpEx = null; - - iInference = null; - - iConfigInferenceEngine = null; - - iKnowledgeMgt = null; - - iConfigKnowledgeManager = null; - - iKnowledgeImport = null; - - iConfigGLCompiler = null; - iDataAccess = null; - - iConfigDataStorage = null; - } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (terminate method): " + String exceptionMessage = "ConfigManager Exception (terminate method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -616,8 +434,10 @@ String configInfo = null; try { configInfo = "ConfigManager; DiamondDog release; "; + configInfo = configInfo + ((IConfig)iDataAccess).getInfo(); + } catch (Exception e) { - exceptionMessage = "ConfigManager Exception (getInfo method): " + String exceptionMessage = "ConfigManager Exception (getInfo method): " + e.getMessage(); EgadssException ex = new EgadssException(exceptionMessage); @@ -635,18 +455,18 @@ * Returns references to the 4 publicly visible interfaces ISysConfig, * IAudit, IKnowedgeMgt, and ITrans */ - public IdentityHashMap getInterfaceRefs() { - IdentityHashMap ihash = new IdentityHashMap(); +// public IdentityHashMap getInterfaceRefs() { +// IdentityHashMap ihash = new IdentityHashMap(); +// +// ihash.put("IAudit", this); +// ihash.put("ISysConfig", this); +// //ihash.put("IKnowledgeMgt", iKnowledgeMgt); +// //ihash.put("ITrans", iTrans); +// +// return ihash; +// +// } - ihash.put("IAudit", this); - ihash.put("ISysConfig", this); - ihash.put("IKnowledgeMgt", iKnowledgeMgt); - ihash.put("ITrans", iTrans); - - return ihash; - - } - } // $Log$ Modified: trunk/egadss/egadss_dev/src/org/egadss/docimpex/DocImpEx.java =================================================================== --- trunk/egadss/egadss_dev/src/org/egadss/docimpex/DocImpEx.java 2006-04-07 21:48:01 UTC (rev 353) +++ trunk/egadss/egadss_dev/src/org/egadss/docimpex/DocImpEx.java 2006-04-29 00:17:03 UTC (rev 354) @@ -1000,6 +1000,7 @@ String configInfo = null; try { configInfo = "DocImpex; DiamondDog release; "; + configInfo = configInfo + ((IConfig)iAuditLog).getInfo(); } catch (Exception e) { exceptionMessage = "DocImpEx Exception (getInfo method): " Modified: trunk/egadss/egadss_dev/src/org/egadss/glcompiler/GLCompiler.java =================================================================== --- trunk/egadss/egadss_dev/src/org/egadss/glcompiler/GLCompiler.java 2006-04-07 21:48:01 UTC (rev 353) +++ trunk/egadss/egadss_dev/src/org/egadss/glcompiler/GLCompiler.java 2006-04-29 00:17:03 UTC (rev 354) @@ -197,7 +197,8 @@ String configInfo = null; try { configInfo = "GLCompiler; DiamondDog release; "; - + configInfo = configInfo + ((IConfig)iAuditLog).getInfo(); + } catch (Exception e) { EgadssException ex = new EgadssException( "GLCompiler Exception (getInfo method): " + e.getMessage()); Modified: trunk/egadss/egadss_dev/src/org/egadss/inferenceengine/InferenceEngine.java =================================================================== --- trunk/egadss/egadss_dev/src/org/egadss/inferenceengine/InferenceEngine.java 2006-04-07 21:48:01 UTC (rev 353) +++ trunk/egadss/egadss_dev/src/org/egadss/inferenceengine/InferenceEngine.java 2006-04-29 00:17:03 UTC (rev 354) @@ -456,9 +456,11 @@ * @see org.egadss.IConfig#getInfo() */ public String getInfo() throws EgadssException { - String configInfo = null; + String configStr = null; + try { - configInfo = "InferenceEngine; DiamondDog release; "; + configStr = "InferenceEngine; DiamondDog release; "; + configStr = configStr + ((IConfig)iAuditLog).getInfo(); } catch (Exception e) { EgadssException ex = new EgadssException( "InferenceEngine Exception (getInfo method): " @@ -470,7 +472,7 @@ throw ex; } - return configInfo; + return configStr; } Modified: trunk/egadss/egadss_dev/src/org/egadss/knowledgemanager/KnowledgeManager.java =================================================================== --- trunk/egadss/egadss_dev/src/org/egadss/knowledgemanager/KnowledgeManager.java 2006-04-07 21:48:01 UTC (rev 353) +++ trunk/egadss/egadss_dev/src/org/egadss/knowledgemanager/KnowledgeManager.java 2006-04-29 00:17:03 UTC (rev 354) @@ -346,9 +346,14 @@ public String getInfo() throws EgadssException { String configInfo = null; - + try { configInfo = "KnowledgeManager Strawman Prototype (in development); "; + configInfo = configInfo + ((IConfig)iDataAccess).getInfo(); + configInfo = configInfo + ((IConfig)iAuditLog).getInfo(); + configInfo = configInfo + ((IConfig)iKnowledgeImport).getInfo(); + configInfo = configInfo + ((IConfig)iInference).getInfo(); + } catch (Exception e) { EgadssException ex = new EgadssException( "KnowledgeManager Exception (getInfo method): " Modified: trunk/egadss/egadss_dev/src/org/egadss/transcontroller/TransController.java =================================================================== --- trunk/egadss/egadss_dev/src/org/egadss/transcontroller/TransController.java 2006-04-07 21:48:01 UTC (rev 353) +++ trunk/egadss/egadss_dev/src/org/egadss/transcontroller/TransController.java 2006-04-29 00:17:03 UTC (rev 354) @@ -255,6 +255,11 @@ String configInfo = null; try { configInfo = "TransController; DiamondDog release; "; + configInfo = configInfo + ((IConfig)iAuditLog).getInfo(); + configInfo = configInfo + ((IConfig)iDocumentImport).getInfo(); + configInfo = configInfo + ((IConfig)iDocumentExport).getInfo(); + configInfo = configInfo + ((IConfig)iInference).getInfo(); + } catch (Exception e) { EgadssException ex = new EgadssException( This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2006-04-07 21:48:12
|
Revision: 353 Author: mcglen Date: 2006-04-07 14:48:01 -0700 (Fri, 07 Apr 2006) ViewCVS: http://svn.sourceforge.net/egadss/?rev=353&view=rev Log Message: ----------- Corrected spelling mistake Added Paths: ----------- trunk/egadss/egadss_dev/auxiliaryResources/ Copied: trunk/egadss/egadss_dev/auxiliaryResources (from rev 351, trunk/egadss/egadss_dev/auxilaryResources) This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: <mc...@us...> - 2006-04-07 21:01:19
|
Revision: 352 Author: mcglen Date: 2006-04-07 14:01:14 -0700 (Fri, 07 Apr 2006) ViewCVS: http://svn.sourceforge.net/egadss/?rev=352&view=rev Log Message: ----------- Correcting spelling mistake of auxiliaryResources ... Removed Paths: ------------- trunk/egadss/egadss_dev/auxilaryResources/ This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |
From: Glen M. <mc...@us...> - 2006-04-07 04:12:22
|
Update of /cvsroot/egadss/egadss/egadss_dev In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv28866 Removed Files: RMIClientResults.xml Log Message: No more rmi functionality. |
From: Glen M. <mc...@us...> - 2006-04-07 04:10:34
|
Update of /cvsroot/egadss/egadss/egadss_dev In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv26302 Modified Files: build.xml Log Message: Velocity Libraries Added. |
From: Glen M. <mc...@us...> - 2006-04-07 04:10:33
|
Update of /cvsroot/egadss/egadss/egadss_dev/lib In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv26302/lib Added Files: velocity-1.4.jar velocity-dep-1.4.jar Log Message: Velocity Libraries Added. |
From: Glen M. <mc...@us...> - 2006-04-06 22:14:47
|
Update of /cvsroot/egadss/egadss/egadss_dev/src/org/egadss/configmanager In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv15366/src/org/egadss/configmanager Modified Files: ConfigManager.java Log Message: Adding logging functionality. |
From: Glen M. <mc...@us...> - 2006-04-06 22:13:04
|
Update of /cvsroot/egadss/egadss/egadss_dev/src/org/egadss/inferenceengine In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv14171/src/org/egadss/inferenceengine Modified Files: InferenceEngine.java Log Message: Adding logging functionality. |
From: Iryna B <iry...@us...> - 2006-03-23 18:17:58
|
Update of /cvsroot/egadss/egadss/egadss_dev/src/org/egadss/webservices In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv22738/org/egadss/webservices Modified Files: SimpleWebService.java Log Message: no message |
From: Iryna B <iry...@us...> - 2006-03-23 00:39:24
|
Update of /cvsroot/egadss/egadss/egadss_dev/src/org/egadss/velocity In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv27450/org/egadss/velocity Modified Files: ClassGenerator.java Log Message: no message |
From: Iryna B <iry...@us...> - 2006-03-23 00:39:23
|
Update of /cvsroot/egadss/egadss/egadss_dev/src/org/egadss/docimpex In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv27450/org/egadss/docimpex Modified Files: DocImpEx.java Log Message: no message |
From: Iryna B <iry...@us...> - 2006-03-23 00:39:23
|
Update of /cvsroot/egadss/egadss/egadss_dev/src/org/egadss/configmanager In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv27450/org/egadss/configmanager Modified Files: Configuration.java Log Message: no message |
From: Iryna B <iry...@us...> - 2006-03-23 00:26:10
|
Update of /cvsroot/egadss/egadss/egadss_dev/auxilaryResources In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv18391 Added Files: clinicalGuideline.xml Log Message: no message |
From: Iryna B <iry...@us...> - 2006-03-23 00:25:37
|
Update of /cvsroot/egadss/egadss/egadss_dev/auxilaryResources In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv17932 Modified Files: AuditTrail.txt EgadssConfig.xml PatientResults.clp patientSummaryStyleSh.xsl resultsFromEgadss.xml temporaryXmlFile.xml transformedPatientSummary.html transformedResultsFromEgadss.xml Log Message: no message |