Work at SourceForge, help us to make it a better place! We have an immediate need for a Support Technician in our San Francisco or Denver office.

Close

Search bugs: !status:closed-duplicate && !status:closed-accepted && !status:wont-fix && !status:closed-fixed && !status:closed Maximize Restore

Showing results of 54

# Summary Milestone Status Owner Created Updated Priority
317 invalid reads in unmapped fastq (missing @ symbol) v0.9.0 open 12 hours ago 12 hours ago 5  
294 Probleme with Bowtie 2 version 2.1.0 v0.9.0 open Ben Langmead 2013-11-28 14 hours ago 5  
280 Out of memory allocating offs[] with 32G Ram v0.9.0 pending Val 2013-03-21 3 days ago 5  
106 crossbow-1.1.0 Soapsnp.pl line 368 None open 2010-10-22 5 days ago 5  
298 -a option reports different read matches for two identical repeats in reference v0.9.0 open 2013-12-26 2014-07-13 5  
309 bowtie2-align died with signal 8 (FPE) (core dumped) v0.9.0 open 2014-04-28 2014-07-13 5  
316 (ERR): Expected bowtie2 to be in same directory with bowtie2-align v0.9.0 open 2014-06-12 2014-06-18 5  
312 bowtie 1.0.1 on mac os x 10.9.2 could not be compiled v0.9.0 open 2014-05-16 2014-06-04 5  
310 Incorrect fastq format of --un output v0.9.0 open 2014-05-12 2014-05-12 5  
308 Incorrect lengths in sam header. Sequences missing from output sam file. v0.9.0 open 2014-04-26 2014-04-26 5  
307 Mapping position of a read was out of the reference sequence v0.9.0 open 2014-04-14 2014-04-16 5  
306 Crash without any errors when using --un for PhiX filtering v0.9.0 open 2014-04-07 2014-04-07 5  
304 Uniqueness miscomputed by Ns in Bowtie 1.0.0 v0.9.0 open Ben Langmead 2014-03-19 2014-03-19 5  
303 XS field is the same for best and non-best scoring alignments of a same read v0.9.0 open 2014-03-12 2014-03-12 5  
299 bug in detection of redundant alignments with soft-clipping v0.9.0 open 2014-01-11 2014-01-11 5  
286 Error in quality conversion v2.1.0.0 None open 2013-05-13 2013-05-13 5  
285 Not catching an obvious alignment None open 2013-05-09 2013-05-09 5  
281 bowtie 0.12.9 + MacOS 10.6 None open 2013-04-01 2013-04-01 5  
276 bowtie2 -k n parameter doesnt report n matches when n exist None open 2013-02-17 2013-02-18 5  
275 bowtie 2 fails to report read as multi-read in paired mode None open 2013-02-09 2013-02-09 5  
265 bowtie2-build failed None open 2013-01-09 2013-01-28 5  
268 bowtie2 overlapping pairs None open 2013-01-20 2013-01-20 5  
267 bowtie2 overlapping pairs None open 2013-01-20 2013-01-20 5  
256 Bowtie2 slower after 2.0.0.beta6 None open 2012-11-05 2013-01-04 5  
  • Ticket Number
  • Summary
  • Milestone
  • Status
  • Owner
  • Creator
  • Created
  • Updated
  • Labels
  • Priority
 
(applies to this page only)
1 2 3 > >> (Page 1 of 3)