Milestone 2.0 Maximize Restore

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# Summary Milestone Status Owner Created Updated
16 2 high quality snps called with low posterior propbablity and lost 2.0 closed 2013-04-22 2013-05-13  
15 Requires Ruby 1.9 or above and complains about Ruby 2.0 2.0 closed Danny Challis 2013-03-14 2013-03-14  
14 Broken line 2.0 closed Danny Challis 2013-02-14 2013-05-30  
13 vcfPrinter output VCF file has incorrect sample format in some of the sample-sites when in indel mode 2.0 closed Danny Challis 2013-01-17 2013-02-06  
12 Error with Atlas INDEL in the WGL 2.0 closed Danny Challis 2012-12-13 2012-12-13  
11 Bug in Atlas-Indel2 --always-include 2.0 closed Danny Challis 2012-12-07 2012-12-07  
10 Math::DomainError in print_nonvar_site with ruby 1.9.2 2.0 closed Danny Challis 2012-11-28 2013-12-25  
9 Consider using fasta index (.fai) if present 2.0 closed Danny Challis 2012-11-24 2012-11-30  
8 Include revision number 2.0 closed Danny Challis 2012-11-21 2012-12-10  
7 Compound heterozygous detection 2.0 closed Jin Yu 2012-11-19 2012-12-17  
6 VCF Printer Functionality and pVCF Design Discussion 2.0 closed Uday Evani 2012-10-29 2012-11-09  
5 Bugs in unreleased prototype version of Atlas2 with --always-include (VIP) 2.0 closed Danny Challis 2012-10-29 2012-10-29  
4 Atlas2 SNP default platform 2.0 closed Jin Yu 2012-10-19 2012-11-16  
3 .snp file output supression? 2.0 closed 2012-10-18 2013-01-10  
2 VIP-site-only functionality? 2.0 closed Jin Yu 2012-10-18 2012-11-16  
1 Test ticket 2.0 closed Uday Evani 2012-10-18 2013-06-21  
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