Hello --

Can you please send the specific errors you are receiving?



On Jul 21, 2008, at 9:03 PM, Palmier, Mark Oliver (MU-Student) wrote:

I am trying to get the APBS plugin within PyMol to work on an enzyme (pdb = 1jk3).  It has 3 bound Ca++ and 2 Zn++.  I keep getting errors and I donít know how to handle the metal ions which most certainly effect solvation.  Iím using PyMol 9.9 and APBS plugin v 1.0.0 and I am working in a Win XP environment.




Mark O. Palmier, MS
Biochemistry Department, 117 Schweitzer Hall
University of Missouri, Columbia, MO  65211
phone: (573) 884-6405; FAX: (573) 884-4812


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Associate Professor, Dept. of Biochemistry and Molecular Biophysics
Center for Computational Biology, Washington University in St. Louis