Hi Goran –

 

I’m sorry but the APBS Windows installation but is one that we’re aware of and have fixed; we’re currently testing a new installer.  Please let us know if you would like to beta test.

 

Do you have PDB2PQR installed locally?  I’m unsure about where you’re trying to run it.

 

Thanks,

__________________________________________________
Nathan Baker
Pacific Northwest National Laboratory
Tel:  509-375-3997
http://nabaker.me

 

From: Göran Larsson [mailto:goran.larsson@medchem.umu.se]
Sent: Wednesday, December 14, 2011 2:38 AM
To: apbs-users@lists.sourceforge.net
Subject: [apbs-users] Installing apbs

 

Error message: Output file missing or unreadable

 

I’m having problems using the APBS plugin in VMD (tried both in Win XP 32 and Ubuntu). I have previously just used the pdb2pqr web service successfully but when I try to run it locally I get the “output file missing or unreadable” error message using the same pqr-file as the web server. I don’t have any spaces in the path, so what could be wrong?

 

Another weird thing is that when I Install APBS, I make C:/program/APBS the installation directory, but it always puts the executive file directly under c:/ and there is no APBS directory.