Hi Daisy –

 

That’s a good question; unfortunately, I don’t know enough about PyMOL to answer.  I’m hoping that someone else on the list can help you with suggestions on how to do this.

 

Thanks,

__________________________________________________
Nathan Baker
Pacific Northwest National Laboratory
Tel:  509-375-3997
http://kdi.pnl.gov/bios/baker.stm

 

From: Daisyang [mailto:daisyang095@gmail.com]
Sent: Friday, September 23, 2011 11:47 AM
To: apbs-users@googlegroups.com
Subject: [apbs-users] Can I use pymol command line to run APBS ?

 

Basically what I am doing is to run pymol through matlab or python, pymol has several command lines for basic operations, I was wondering if I could call APBS by using the pymol command line so that I can run APBS through matlab or python ?

Thanks

Daisy