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[Obo-svn-commit] SF.net SVN: obo: [740] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2007-07-18 20:07

Revision: 740
          http://svn.sourceforge.net/obo/?rev=740&view=rev
Author:   mgibson
Date:     2007-07-18 13:07:43 -0700 (Wed, 18 Jul 2007)

Log Message:
-----------
jetty jar for smart atlas jnlp

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-07-18 20:06:17 UTC (rev 739)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-07-18 20:07:43 UTC (rev 740)
@@ -37,6 +37,7 @@
 	<jar href="jars/te-common.jar" />
 	<jar href="jars/log4j-1.2.13.jar" />
 	<jar href="jars/jh.jar" />
+	<jar href="jars/jetty-6.1.4.jar" />
 </resources>
 <!-- no cmd line param will ask user for config at initialization -->
 <application-desc main-class="phenote.main.Phenote">


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[Obo-svn-commit] SF.net SVN: obo: [757] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2007-07-20 12:22

Revision: 757
          http://svn.sourceforge.net/obo/?rev=757&view=rev
Author:   mgibson
Date:     2007-07-20 05:22:27 -0700 (Fri, 20 Jul 2007)

Log Message:
-----------
i think for now smart atlas webstart should be -c not -u
especially since -u is a little quirky?
though -c is a wipeout that doesnt jibe will with 
preserving column widths - hmmmmm - nicole - feelings?

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-07-19 23:25:41 UTC (rev 756)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-07-20 12:22:27 UTC (rev 757)
@@ -44,7 +44,7 @@
 </resources>
 <!-- no cmd line param will ask user for config at initialization -->
 <application-desc main-class="phenote.main.Phenote">
-        <argument>-u</argument>
+        <argument>-c</argument>
         <argument>/smart-atlas.cfg</argument>
 </application-desc>
 </jnlp>


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[Obo-svn-commit] SF.net SVN: obo: [758] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2007-07-20 12:24

Revision: 758
          http://svn.sourceforge.net/obo/?rev=758&view=rev
Author:   mgibson
Date:     2007-07-20 05:24:05 -0700 (Fri, 20 Jul 2007)

Log Message:
-----------
put it back to -u to preserve column widths
at the risk of having funny merges

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-07-20 12:22:27 UTC (rev 757)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-07-20 12:24:05 UTC (rev 758)
@@ -44,7 +44,7 @@
 </resources>
 <!-- no cmd line param will ask user for config at initialization -->
 <application-desc main-class="phenote.main.Phenote">
-        <argument>-c</argument>
+        <argument>-u</argument>
         <argument>/smart-atlas.cfg</argument>
 </application-desc>
 </jnlp>


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[Obo-svn-commit] SF.net SVN: obo: [862] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2007-08-30 22:00

Revision: 862
          http://obo.svn.sourceforge.net/obo/?rev=862&view=rev
Author:   mgibson
Date:     2007-08-30 15:00:48 -0700 (Thu, 30 Aug 2007)

Log Message:
-----------
added jars

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-08-30 21:20:06 UTC (rev 861)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2007-08-30 22:00:48 UTC (rev 862)
@@ -42,6 +42,7 @@
 	<jar href="jars/swixml.jar" />
 	<jar href="jars/jdom.jar" />
 	<jar href="jars/quaqua.jar" />
+	<jar href="jars/jebl-0.4.jar" />
 </resources>
 <!-- no cmd line param will ask user for config at initialization -->
 <application-desc main-class="phenote.main.Phenote">


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[Obo-svn-commit] SF.net SVN: obo: [1566] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2008-03-03 14:56

Revision: 1566
          http://obo.svn.sourceforge.net/obo/?rev=1566&view=rev
Author:   mgibson
Date:     2008-03-03 06:56:06 -0800 (Mon, 03 Mar 2008)

Log Message:
-----------
woops - need to remember to keep smart-atlas.jnlp up to date
its reason for existence is that when you launch phenote from 
smart atlas it will go right into the smart atlas config as it should
rather than asking the user which config they want - since they are launching
from smart atlas no reason to ask that question
downside is you hafta keep separate smart atlas jnlp up to date
would be nice if there was someway to pass param of config in
to webstart (???) - the birn folk do this thing where they actually 
rewrite the whole jnlp file every time - hmmm

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-02-29 22:40:10 UTC (rev 1565)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-03-03 14:56:06 UTC (rev 1566)
@@ -28,7 +28,9 @@
 	<j2se version="1.5+" initial-heap-size="64m" max-heap-size="600m" />
 	<jar href="jars/phenote.jar" />
 	<jar href="jars/oboedit.jar" />
-	<jar href="jars/org.geneontology.jar" />
+	<jar href="jars/obo.jar" />
+	<jar href="jars/bbop.jar" />
+
 	<jar href="jars/BrowserLauncher2-10rc4.jar" />
 	<jar href="jars/jsr173_1.0_api.jar" />
 	<jar href="jars/phenoxmlbeans.jar" />
@@ -44,10 +46,20 @@
 	<jar href="jars/jdom.jar" />
 	<jar href="jars/quaqua.jar" />
 	<jar href="jars/jebl-0.4.jar" />
-	<jar href="jars/swing-layout.jar" />
 	<jar href="jars/glazedlists-1.7.0_java15.jar" />
+	<jar  href="jars/swing-layout.jar"/>
+	<jar  href="jars/swingx-2007_10_14.jar"/>
+	<jar  href="jars/eutils.jar"/>
+	<jar href="jars/commons-discovery-0.2.jar"/>
+	<jar href="jars/commons-lang-2.1.jar"/>
+	<jar href="jars/commons-beanutils-1.6.jar"/>
+	<jar href="jars/commons-logging-1.0.4.jar"/>
 	<nativelib href="jars/phenote-nativelibs.jar"/>
+	<jar href="jars/saaj.jar"/>
+	<jar href="jars/jaxrpc.jar"/>
+	<jar href="jars/wsdl4j-1.5.1.jar"/>
 
+
 </resources>
 <!-- was smart-atlas.cfg, merged into birn.cfg  -->
 <application-desc main-class="phenote.main.Phenote">


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[Obo-svn-commit] SF.net SVN: obo: [1570] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2008-03-03 17:21

Revision: 1570
          http://obo.svn.sourceforge.net/obo/?rev=1570&view=rev
Author:   mgibson
Date:     2008-03-03 09:22:00 -0800 (Mon, 03 Mar 2008)

Log Message:
-----------
title

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-03-03 17:06:24 UTC (rev 1569)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-03-03 17:22:00 UTC (rev 1570)
@@ -4,7 +4,7 @@
 codebase="http://phenote.org/phenote/@@phenote.version@@"
 href="phenote.jnlp">
 <information>
-	<title>Phenote @@phenote.version@...>
+	<title>Phenote @@phenote.version@@ for SmartAtlas</title>
 	<vendor>National Center for Biomedical Ontology</vendor>
 	<icon href="/images/elephant_icon.jpg" />
 	<description>Phenote standalone app via webstart</description>


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[Obo-svn-commit] SF.net SVN: obo: [1853] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2008-06-13 20:34

Revision: 1853
          http://obo.svn.sourceforge.net/obo/?rev=1853&view=rev
Author:   mgibson
Date:     2008-06-13 13:34:56 -0700 (Fri, 13 Jun 2008)

Log Message:
-----------
jars dir

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-06-13 20:34:19 UTC (rev 1852)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-06-13 20:34:56 UTC (rev 1853)
@@ -60,19 +60,19 @@
 	<jar href="jars/wsdl4j-1.5.1.jar"/>
 
   <!-- for soap adapter to ckb -->
-	<jar href="jsr181-api.jar"/>
-	<jar href="jaxws-api.jar"/>
-	<jar href="jaxb-api.jar"/>
-	<jar href="jaxws-rt.jar"/>
-	<jar href="jaxb-impl.jar"/>
-	<jar href="activation.jar"/>
-	<jar href="jaxb-xjc.jar"/>
-	<jar href="stax-ex.jar"/>
-	<jar href="saaj-impl.jar"/>
-	<jar href="sjsxp.jar"/>
-	<jar href="stat-ex.jar"/>
-	<jar href="streambuffer.jar"/>
-	<jar href="saaj-api.jar"/>
+	<jar href="jars/jsr181-api.jar"/>
+	<jar href="jars/jaxws-api.jar"/>
+	<jar href="jars/jaxb-api.jar"/>
+	<jar href="jars/jaxws-rt.jar"/>
+	<jar href="jars/jaxb-impl.jar"/>
+	<jar href="jars/activation.jar"/>
+	<jar href="jars/jaxb-xjc.jar"/>
+	<jar href="jars/stax-ex.jar"/>
+	<jar href="jars/saaj-impl.jar"/>
+	<jar href="jars/sjsxp.jar"/>
+	<jar href="jars/stat-ex.jar"/>
+	<jar href="jars/streambuffer.jar"/>
+	<jar href="jars/saaj-api.jar"/>
 
 </resources>
 <!-- was smart-atlas.cfg, merged into birn.cfg  -->


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[Obo-svn-commit] SF.net SVN: obo: [1857] phenote/trunk/doc/phenote-website/ phenote-smart-atlas.jnlp

From: <mgibson@us...> - 2008-06-13 21:14

Revision: 1857
          http://obo.svn.sourceforge.net/obo/?rev=1857&view=rev
Author:   mgibson
Date:     2008-06-13 14:14:23 -0700 (Fri, 13 Jun 2008)

Log Message:
-----------
jar jar

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp

Modified: phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp
===================================================================
--- phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-06-13 21:06:25 UTC (rev 1856)
+++ phenote/trunk/doc/phenote-website/phenote-smart-atlas.jnlp	2008-06-13 21:14:23 UTC (rev 1857)
@@ -60,6 +60,7 @@
 	<jar href="jars/wsdl4j-1.5.1.jar"/>
 
   <!-- for soap adapter to ckb -->
+	<jar href="jars/birn-soap.jar"/>
 	<jar href="jars/jsr181-api.jar"/>
 	<jar href="jars/jaxws-api.jar"/>
 	<jar href="jars/jaxb-api.jar"/>


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