First post here, so hello to everybody!
I would like to produce a movie where covalent bonds break and form.
However, when I load the .pdb files in PyMOL and play a movie, the bond
status (formed or broken) stays the same as seen on the first state,
even if bond lenghts change considerably.
Any tips on how to do this are welcome. I have googled and searched the
archives, but found nothing.
Guilherme Menegon Arantes, PhD São Paulo, Brasil