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Email Archive: obo-phenotype-commits (read-only)

2006:	_Jan	_Feb	_Mar	_Apr	_May	_Jun	_Jul	_Aug	_Sep	_Oct (1)	_Nov (26)	_Dec (13)
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2008:	_Jan (30)	_Feb (54)	_Mar (51)	_Apr (51)	_May (39)	_Jun (39)	_Jul (35)	_Aug (51)	_Sep (36)	_Oct (47)	_Nov (55)	_Dec (41)
2009:	_Jan (38)	_Feb (52)	_Mar (48)	_Apr (35)	_May (44)	_Jun (46)	_Jul (43)	_Aug (61)	_Sep (52)	_Oct (134)	_Nov (136)	_Dec (194)
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2013:	_Jan (13)	_Feb (11)	_Mar (6)	_Apr (11)	_May (36)	_Jun	_Jul	_Aug	_Sep	_Oct	_Nov	_Dec


S	M	T	W	T	F	S
					1	2
						(2)
3	4	5	6	7	8	9
(2)	(2)	(2)	(2)	(2)	(5)	(2)
10	11	12	13	14	15	16
(4)	(2)	(2)	(2)	(11)	(2)	(7)
17	18	19	20	21	22	23
(4)	(2)	(2)	(12)	(2)	(2)
24	25	26	27	28	29	30
(2)	(7)	(2)	(2)	(2)	(2)	(3)
31
(2)

[Obo-phenotype-commits] obo/ontology/phenotype/plant_traits plant_trait.obo, 1.132, 1.133

From: Seth Carbon <sjcarbon@us...> - 2010-01-16 08:34

Update of /cvsroot/obo/obo/ontology/phenotype/plant_traits
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv5750/phenotype/plant_traits

Modified Files:
	plant_trait.obo 
Log Message:
Automated file update

[Obo-phenotype-commits] obo/ontology/phenotype human_disease.obo, 1.112, 1.113 mosquito_insecticide_resistance.obo, 1.694, 1.695

From: Seth Carbon <sjcarbon@us...> - 2010-01-16 08:34

Update of /cvsroot/obo/obo/ontology/phenotype
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv5750/phenotype

Modified Files:
	human_disease.obo mosquito_insecticide_resistance.obo 
Log Message:
Automated file update

Index: human_disease.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/human_disease.obo,v
retrieving revision 1.112
retrieving revision 1.113
diff -C2 -d -r1.112 -r1.113
*** human_disease.obo	15 Jan 2010 08:07:04 -0000	1.112
--- human_disease.obo	16 Jan 2010 08:09:55 -0000	1.113
***************
*** 1,4 ****
  format-version: 1.2
! date: 14:01:2010 17:20
  saved-by: snadendla
  auto-generated-by: OBO-Edit 2.0
--- 1,4 ----
  format-version: 1.2
! date: 15:01:2010 16:42
  saved-by: snadendla
  auto-generated-by: OBO-Edit 2.0
***************
[...3824 lines suppressed...]
***************
*** 503831,503841 ****
--- 503582,503598 ----
  xref: ICD9CM_2003:491.2
  xref: ICD9CM_2004:491.2
+ xref: ICD9CM_2004:491.22
  xref: ICD9CM_2005:491.2
+ xref: ICD9CM_2005:491.22
  xref: ICD9CM_2006:491.2
+ xref: ICD9CM_2006:491.22
  xref: SNOMEDCT_2005_01_31:185086009
  xref: SNOMEDCT_2005_01_31:195952000
  xref: UMLS_CUI:C0155874
+ xref: UMLS_CUI:C1456131
  xref: UMLS_ICD9CM_2005_AUI:A0276759
+ xref: UMLS_ICD9CM_2005_AUI:A6995059
  xref: UMLS_ICD9CM_2006_AUI:A8345585
+ xref: UMLS_ICD9CM_2006_AUI:A8378416
  xref: UMLS_MTHICD9_2005_AUI:A1870215
  xref: UMLS_MTHICD9_2005_AUI:A1870218

[Obo-phenotype-commits] obo/ontology/phenotype/disease_xp disease_xp_quality.obo, NONE, 1.1 disease_xp_FMA.obo, 1.2, 1.3 disease_xp_cell.obo, 1.2, 1.3

From: Chris Mungall <cmungall@us...> - 2010-01-16 01:42

Update of /cvsroot/obo/obo/ontology/phenotype/disease_xp
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv9866

Modified Files:
	disease_xp_FMA.obo disease_xp_cell.obo 
Added Files:
	disease_xp_quality.obo 
Log Message:


--- NEW FILE: disease_xp_quality.obo ---
[Term]
id: DOID:0050017 ! acute chagas' disease with heart involvement
intersection_of: DOID:12569 ! chagas' cardiomyopathy
intersection_of: OBO_REL:has_quality PATO:0000389 ! acute

[Term]
id: DOID:0050018 ! chronic chagas' disease with heart involvement
intersection_of: DOID:12569 ! chagas' cardiomyopathy
intersection_of: OBO_REL:has_quality PATO:0001863 ! chronic

[Term]
id: DOID:0050076 ! acute pulmonary blastomycosis
intersection_of: DOID:0050075 ! pulmonary blastomycosis
intersection_of: OBO_REL:has_quality PATO:0000389 ! acute

[Term]
id: DOID:0050077 ! chronic pulmonary blastomycosis
intersection_of: DOID:0050075 ! pulmonary blastomycosis
intersection_of: OBO_REL:has_quality PATO:0001863 ! chronic
[...1451 lines suppressed...]
[Term]
id: DOID:9736 ! blue drum syndrome
intersection_of: DOID:11179 ! otitis media with effusion
intersection_of: OBO_REL:has_quality PATO:0000389 ! acute

[Term]
id: DOID:9890 ! intermittent alternating esotropia
intersection_of: DOID:9888 ! alternating esotropia
intersection_of: OBO_REL:has_quality PATO:0000690 ! discontinuous

[Term]
id: DOID:9937 ! chronic dacryocystitis
intersection_of: DOID:9938 ! dacryocystitis
intersection_of: OBO_REL:has_quality PATO:0001863 ! chronic

[Term]
id: DOID:9941 ! chronic adenitis any lymph node, except mesenteric
intersection_of: DOID:1602 ! lymphadenitis
intersection_of: OBO_REL:has_quality PATO:0001863 ! chronic


Index: disease_xp_FMA.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/disease_xp/disease_xp_FMA.obo,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** disease_xp_FMA.obo	16 Jan 2010 00:58:47 -0000	1.2
--- disease_xp_FMA.obo	16 Jan 2010 01:42:49 -0000	1.3
***************
*** 227,236 ****
  id: DOID:10308 ! infectious peripheral neuropathy
  intersection_of: DOID:4886 ! nervous system infection
! intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
! 
! [Term]
! id: DOID:1034 ! hematopoietic neoplasms
! intersection_of: DOID:162 ! cancer
! intersection_of: OBO_REL:occurs_in FMA:9670 ! blood
  
  [Term]
--- 227,231 ----
  id: DOID:10308 ! infectious peripheral neuropathy
  intersection_of: DOID:4886 ! nervous system infection
! intersection_of: OBO_REL:occurs_in FMA:9903 ! Peripheral nervous system
  
  [Term]
***************
*** 665,673 ****
  
  [Term]
- id: DOID:11864 ! peripheral focal chorioretinitis
- intersection_of: DOID:1979 ! focal chorioretinitis
- intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
- 
- [Term]
  id: DOID:1187 ! tibial neuropathy
  intersection_of: DOID:870 ! neuropathy
--- 660,663 ----
***************
*** 702,706 ****
  id: DOID:1192 ! peripheral nervous system neoplasms
  intersection_of: DOID:1193 ! nervous system neoplasms
! intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
  
  [Term]
--- 692,696 ----
  id: DOID:1192 ! peripheral nervous system neoplasms
  intersection_of: DOID:1193 ! nervous system neoplasms
! intersection_of: OBO_REL:occurs_in FMA:9903 ! Peripheral nervous system
  
  [Term]
***************
*** 860,868 ****
  
  [Term]
- id: DOID:12388 ! central diabetes insipidus
- intersection_of: DOID:9409 ! diabetes insipidus
- intersection_of: OBO_REL:occurs_in FMA:30328 ! central
- 
- [Term]
  id: DOID:12403 ! tinea pedis
  intersection_of: DOID:8913 ! dermatophytosis
--- 850,853 ----
***************
*** 1052,1056 ****
  id: DOID:13069 ! peripheral nervous system disease
  intersection_of: DOID:863 ! nervous system disease
! intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
  
  [Term]
--- 1037,1041 ----
  id: DOID:13069 ! peripheral nervous system disease
  intersection_of: DOID:863 ! nervous system disease
! intersection_of: OBO_REL:occurs_in FMA:9903 ! Peripheral nervous system
  
  [Term]
***************
*** 1070,1078 ****
  
  [Term]
- id: DOID:13098 ! central retinal artery occlusion
- intersection_of: DOID:8483 ! retinal artery occlusion
- intersection_of: OBO_REL:occurs_in FMA:30328 ! central
- 
- [Term]
  id: DOID:131 ! rhabdomyoma of the vagina
  intersection_of: DOID:2650 ! rhabdomyoma
--- 1055,1058 ----
***************
*** 2105,2113 ****
  
  [Term]
- id: DOID:2450 ! central retinal vein occlusion
- intersection_of: DOID:1727 ! retinal vein occlusion
- intersection_of: OBO_REL:occurs_in FMA:30328 ! central
- 
- [Term]
  id: DOID:2472 ! cellulitis of hand
  intersection_of: DOID:3488 ! cellulitis
--- 2085,2088 ----
***************
*** 2572,2576 ****
  id: DOID:3193 ! peripheral nerve sheath neoplasm
  intersection_of: DOID:3194 ! nerve sheath tumors
! intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
  
  [Term]
--- 2547,2551 ----
  id: DOID:3193 ! peripheral nerve sheath neoplasm
  intersection_of: DOID:3194 ! nerve sheath tumors
! intersection_of: OBO_REL:occurs_in FMA:9903 ! Peripheral nervous system
  
  [Term]
***************
*** 2662,2666 ****
  id: DOID:331 ! central nervous system disease
  intersection_of: DOID:863 ! nervous system disease
! intersection_of: OBO_REL:occurs_in FMA:30328 ! central
  
  [Term]
--- 2637,2641 ----
  id: DOID:331 ! central nervous system disease
  intersection_of: DOID:863 ! nervous system disease
! intersection_of: OBO_REL:occurs_in FMA:55675 ! Neuraxis
  
  [Term]
***************
*** 2705,2713 ****
  
  [Term]
- id: DOID:3374 ! peripheral osteosarcoma
- intersection_of: DOID:3347 ! osteosarcoma
- intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
- 
- [Term]
  id: DOID:3376 ! osteosarcoma of bone
  intersection_of: DOID:3347 ! osteosarcoma
--- 2680,2683 ----
***************
*** 2922,2926 ****
  id: DOID:3620 ! central nervous system neoplasms
  intersection_of: DOID:1193 ! nervous system neoplasms
! intersection_of: OBO_REL:occurs_in FMA:30328 ! central
  
  [Term]
--- 2892,2896 ----
  id: DOID:3620 ! central nervous system neoplasms
  intersection_of: DOID:1193 ! nervous system neoplasms
! intersection_of: OBO_REL:occurs_in FMA:55675 ! Neuraxis
  
  [Term]
***************
*** 3765,3773 ****
  
  [Term]
- id: DOID:4758 ! peripheral anterior synechiae
- intersection_of: DOID:4726 ! anterior synechiae
- intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
- 
- [Term]
  id: DOID:4759 ! benign neoplasm of maxillary sinus
  intersection_of: DOID:167 ! benign neoplasm
--- 3735,3738 ----
***************
*** 3975,3983 ****
  
  [Term]
- id: DOID:4928 ! intrahepatic cholangiocarcinoma
- intersection_of: DOID:4947 ! cholangiocarcinoma
- intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
- 
- [Term]
  id: DOID:4930 ! adenocarcinoma of nasal cavity
  intersection_of: DOID:299 ! adenocarcinoma
--- 3940,3943 ----
***************
*** 5757,5761 ****
  id: DOID:6764 ! peripheral neuroblastoma
  intersection_of: DOID:769 ! neuroblastoma
! intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
  
  [Term]
--- 5717,5721 ----
  id: DOID:6764 ! peripheral neuroblastoma
  intersection_of: DOID:769 ! neuroblastoma
! intersection_of: OBO_REL:occurs_in FMA:9903 ! Peripheral nervous system
  
  [Term]
***************
*** 6765,6773 ****
  
  [Term]
- id: DOID:8711 ! neurofibromatosis, type 1 [von recklinghausen's disease]
- intersection_of: DOID:8712 ! neurofibromatosis, unspecified
- intersection_of: OBO_REL:occurs_in FMA:74552 ! peripheral
- 
- [Term]
  id: DOID:8718 ! carcinoma in situ of respiratory system, part unspecified
  intersection_of: DOID:8719 ! carcinoma in situ
--- 6725,6728 ----
***************
*** 6980,6988 ****
  
  [Term]
- id: DOID:9137 ! neurofibromatosis, type 2 [acoustic neurofibromatosis]
- intersection_of: DOID:8712 ! neurofibromatosis, unspecified
- intersection_of: OBO_REL:occurs_in FMA:30328 ! central
- 
- [Term]
  id: DOID:9138 ! carcinoma in situ of stomach
  intersection_of: DOID:8719 ! carcinoma in situ
--- 6935,6938 ----
***************
*** 7245,7253 ****
  
  [Term]
- id: DOID:9910 ! central corneal ulcer
- intersection_of: DOID:8463 ! corneal ulcer
- intersection_of: OBO_REL:occurs_in FMA:30328 ! central
- 
- [Term]
  id: DOID:9914 ! cancer of mediastinum
  intersection_of: DOID:162 ! cancer
--- 7195,7198 ----
***************
*** 7273,7274 ****
--- 7218,7234 ----
  intersection_of: DOID:264 ! hemangiopericytoma
  intersection_of: OBO_REL:occurs_in FMA:53074 ! orbit
+ 
+ [Term]
+ id: DOID:3638 ! spinal cord neoplasm
+ intersection_of: DOID:162 ! cancer
+ intersection_of: OBO_REL:occurs_in FMA:7647 ! Spinal cord
+ 
+ [Term]
+ id: DOID:5612 ! spinal neoplasm
+ intersection_of: DOID:162 ! cancer
+ intersection_of: OBO_REL:occurs_in FMA:13478 ! Vertebral column
+ 
+ [Term]
+ id: DOID:5772 ! hematopoietic neoplasm of central nervous system
+ intersection_of: DOID:1034 ! hematopoietic neoplasm
+ intersection_of: OBO_REL:inheres_in FMA:55675 ! neuraxis

Index: disease_xp_cell.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/disease_xp/disease_xp_cell.obo,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** disease_xp_cell.obo	16 Jan 2010 00:58:47 -0000	1.2
--- disease_xp_cell.obo	16 Jan 2010 01:42:49 -0000	1.3
***************
*** 325,326 ****
--- 325,353 ----
  intersection_of: develops_from CL:0000786 ! plasma cell
  
+ [Term]
+ id: DOID:1034 ! hematopoietic neoplasms
+ intersection_of: DOID:162 ! cancer
+ intersection_of: develops_from CL:0000988 ! hematopoietic cell
+ 
+ [Term]
+ id: DOID:3182 ! Oligodendroglial neoplasm
+ intersection_of: DOID:2627  ! Glioma
+ intersection_of: develops_from CL:0000128 ! oligodendrocyte
+ 
+ [Term]
+ id: DOID:3182 ! Oligodendroglial neoplasm
+ intersection_of: DOID:2627  ! Glioma
+ intersection_of: develops_from CL:0000128 ! oligodendrocyte
+ 
+ [Term]
+ id: DOID:3181 ! Oligodendroglioma
+ intersection_of: DOID:3070  ! Malignant Glioma
+ intersection_of: develops_from CL:0000128 ! oligodendrocyte
+ 
+ [Term]
+ id: DOID:3185 ! glial tumor of spinal cord
+ intersection_of: DOID:3638  ! spinal cord neoplasm
+ intersection_of: develops_from CL:0000125 ! glial cell
+ 
+ 
+

[Obo-phenotype-commits] obo/ontology/phenotype/disease_xp - New directory

From: Chris Mungall <cmungall@us...> - 2010-01-16 01:18

Update of /cvsroot/obo/obo/ontology/phenotype/disease_xp
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv24154/disease_xp

Log Message:
Directory /cvsroot/obo/obo/ontology/phenotype/disease_xp added to the repository

[Obo-phenotype-commits] obo/ontology/phenotype/disease_xp disease_xp_all-merged.obo, 1.1, 1.2

From: Chris Mungall <cmungall@us...> - 2010-01-16 01:13

Update of /cvsroot/obo/obo/ontology/phenotype/disease_xp
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv27952

Modified Files:
	disease_xp_all-merged.obo 
Log Message:


Index: disease_xp_all-merged.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/disease_xp/disease_xp_all-merged.obo,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** disease_xp_all-merged.obo	16 Jan 2010 00:34:32 -0000	1.1
--- disease_xp_all-merged.obo	16 Jan 2010 00:38:38 -0000	1.2
***************
*** 1,4 ****
  format-version: 1.2
! date: 15:01:2010 16:32
  subsetdef: goslim_candida "Candida GO slim"
  subsetdef: goslim_generic "Generic GO slim"
--- 1,4 ----
  format-version: 1.2
! date: 15:01:2010 16:37
  subsetdef: goslim_candida "Candida GO slim"
  subsetdef: goslim_generic "Generic GO slim"
***************
[...19716 lines suppressed...]
- [Typedef]
  id: develops_from
  name: develops_from
--- 531994,531997 ----
***************
*** 532016,532021 ****
  
  [Typedef]
! id: OBO_REL:inheres_in
! name: inheres_in
  
  [Typedef]
--- 532010,532016 ----
  
  [Typedef]
! id: OBO_REL:occurs_in
! name: occurs_in
! namespace: file:/Users/cjm/cvs/obo/ontology/phenotype/disease_xp/relations_disease_xp.obo
  
  [Typedef]

[Obo-phenotype-commits] obo/ontology/phenotype/disease_xp disease_xp_FMA.obo, NONE, 1.1 disease_xp_all-merged.obo, NONE, 1.1 disease_xp_biological_process.obo, NONE, 1.1 disease_xp_cell.obo, NONE, 1.1

From: Chris Mungall <cmungall@us...> - 2010-01-16 00:59

Update of /cvsroot/obo/obo/ontology/phenotype/disease_xp
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv27287

Added Files:
	disease_xp_FMA.obo disease_xp_all-merged.obo 
	disease_xp_biological_process.obo disease_xp_cell.obo 
Log Message:


--- NEW FILE: disease_xp_biological_process.obo ---
[Term]
id: DOID:0000405 ! disease of response to stimulus
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0050896 ! response to stimulus

[Term]
id: DOID:0000725 ! cell growth disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0016049 ! cell growth

[Term]
id: DOID:0000818 ! cell proliferation disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0008283 ! cell proliferation

[Term]
id: DOID:0014667 ! disease of metabolism
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0008152 ! metabolic process

[Term]
id: DOID:1058 ! amino acid transport disorder
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0006865 ! amino acid transport

[Term]
id: DOID:12226 ! hearing problem
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0007605 ! sensory perception of sound

[Term]
id: DOID:14563 ! reproduction disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0000003 ! reproduction

[Term]
id: DOID:14565 ! physiological process disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0008150 ! biological_process

[Term]
id: DOID:14567 ! growth disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0040007 ! growth

[Term]
id: DOID:14568 ! pigmentation disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0043473 ! pigmentation

[Term]
id: DOID:14569 ! regulation of biological process disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0050789 ! regulation of biological process

[Term]
id: DOID:150 ! disease of behavior
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0007610 ! behavior

[Term]
id: DOID:1764 ! chondrodystrophy
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0051216 ! cartilage development

[Term]
id: DOID:1765 ! developmental bone disease
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0060348 ! bone development

[Term]
id: DOID:1923 ! sex differentiation disorders
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0007548 ! sex differentiation

[Term]
id: DOID:2485 ! phosphorus metabolism disorders
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0006793 ! phosphorus metabolic process

[Term]
id: DOID:2847 ! learning disorders
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0007612 ! learning

[Term]
id: DOID:287 ! vision disorders
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0007601 ! visual perception

[Term]
id: DOID:2986 ! iga glomerulonephritis
intersection_of: DOID:2921 ! glomerulonephritis
intersection_of: disrupts GO:0035282 ! segmentation

[Term]
id: DOID:3067 ! taste disorders
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0050909 ! sensory perception of taste

[Term]
id: DOID:344 ! disease of biological process
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0008150 ! biological_process

[Term]
id: DOID:4761 ! memory disorders
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0007613 ! memory

[Term]
id: DOID:578 ! urination disorders
intersection_of: DOID:4 ! disease
intersection_of: disrupts GO:0060073 ! micturition

[Term]
id: DOID:6675 ! menopausal syndrome
intersection_of: DOID:225 ! syndrome
intersection_of: disrupts GO:0042697 ! menopause

[Typedef]
id: disrupts
name: disrupts

--- NEW FILE: disease_xp_FMA.obo ---
[Term]
id: DOID:0000000 ! gallbladder disease
intersection_of: DOID:4 ! disease
intersection_of: OBO_REL:inheres_in FMA:7202 ! gallbladder

[Term]
id: DOID:0000815 ! spleen disease
intersection_of: DOID:4 ! disease
intersection_of: OBO_REL:inheres_in FMA:7196 ! spleen

[Term]
id: DOID:0050009 ! intestinal strongyloidiasis
intersection_of: DOID:10955 ! strongyloidiasis
intersection_of: OBO_REL:inheres_in FMA:7199 ! intestine

[Term]
id: DOID:0050096 ! dermatophytosis of beard
intersection_of: DOID:8913 ! dermatophytosis
intersection_of: OBO_REL:inheres_in FMA:54240 ! beard
[...7524 lines suppressed...]
intersection_of: OBO_REL:inheres_in FMA:5034 ! lymph node

[Term]
id: DOID:9986 ! lymphoma of orbit
intersection_of: DOID:353 ! lymphoma
intersection_of: OBO_REL:inheres_in FMA:53074 ! orbit

[Term]
id: DOID:9987 ! sarcoma of orbit
intersection_of: DOID:1115 ! sarcoma
intersection_of: OBO_REL:inheres_in FMA:53074 ! orbit

[Term]
id: DOID:9991 ! hemangiopericytoma of orbit
intersection_of: DOID:264 ! hemangiopericytoma
intersection_of: OBO_REL:inheres_in FMA:53074 ! orbit

[Typedef]
id: OBO_REL:inheres_in
name: inheres_in

--- NEW FILE: disease_xp_cell.obo ---

[Term]
id: DOID:1035 ! natural killer cell leukemia
intersection_of: DOID:1240 ! leukemia
intersection_of: OBO_REL:inheres_in CL:0000623 ! natural killer cell

[Term]
id: DOID:10361 ! eosinophilic meningitis
intersection_of: DOID:9471 ! meningitis
intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil

[Term]
id: DOID:11686 ! seborrheic keratosis of eyelid
intersection_of: DOID:3175 ! papilloma of eyelid
intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell

[Term]
id: DOID:12155 ! lymphocytic choriomeningitis
intersection_of: DOID:9471 ! meningitis
intersection_of: OBO_REL:inheres_in CL:0000542 ! lymphocyte

[Term]
id: DOID:12621 ! stem cell leukemia
intersection_of: DOID:1240 ! leukemia
intersection_of: OBO_REL:inheres_in CL:0000034 ! stem cell

[Term]
id: DOID:13922 ! eosinophilic esophagitis
intersection_of: DOID:11963 ! esophagitis
intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil

[Term]
id: DOID:2084 ! cellular angiofibroma
intersection_of: DOID:3242 ! angiofibroma
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:2157 ! germ cell cancer
intersection_of: DOID:162 ! cancer
intersection_of: OBO_REL:inheres_in CL:0000586 ! germ cell

[Term]
id: DOID:2218 ! blood platelet disorders
intersection_of: DOID:4 ! disease
intersection_of: OBO_REL:inheres_in CL:0000233 ! platelet

[Term]
id: DOID:231 ! motor neuron disease
intersection_of: DOID:4 ! disease
intersection_of: OBO_REL:inheres_in CL:0000100 ! motor neuron

[Term]
id: DOID:2398 ! benign tumor of germ cell
intersection_of: DOID:167 ! benign neoplasm
intersection_of: OBO_REL:inheres_in CL:0000586 ! germ cell

[Term]
id: DOID:2412 ! skin tumor of neural origin
intersection_of: DOID:3165 ! skin neoplasms
intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron

[Term]
id: DOID:2417 ! melanocytic nevus
intersection_of: DOID:2681 ! nevus
intersection_of: OBO_REL:inheres_in CL:0000148 ! melanocyte

[Term]
id: DOID:2513 ! basal cell carcinoma
intersection_of: DOID:3451 ! carcinoma of skin
intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell

[Term]
id: DOID:2655 ! acinar cell adenoma
intersection_of: DOID:657 ! adenoma
intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell

[Term]
id: DOID:3025 ! acinar cell carcinoma
intersection_of: DOID:305 ! carcinoma
intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell

[Term]
id: DOID:3196 ! cellular schwannoma
intersection_of: DOID:3192 ! neurilemmoma
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:3282 ! dendritic cell thymoma
intersection_of: DOID:3275 ! thymoma
intersection_of: OBO_REL:inheres_in CL:0000451 ! dendritic cell

[Term]
id: DOID:3372 ! chondroblastic osteosarcoma
intersection_of: DOID:3347 ! osteosarcoma
intersection_of: OBO_REL:inheres_in CL:0000058 ! chondroblast

[Term]
id: DOID:350 ! mastocytosis
intersection_of: DOID:4 ! disease
intersection_of: OBO_REL:inheres_in CL:0000097 ! mast cell

[Term]
id: DOID:3784 ! cellular fibroma
intersection_of: DOID:181 ! fibroma
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:4030 ! eosinophilic gastritis
intersection_of: DOID:4029 ! gastritis
intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil

[Term]
id: DOID:4031 ! eosinophilic gastroenteritis
intersection_of: DOID:2326 ! gastroenteritis
intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil

[Term]
id: DOID:4035 ! lymphocytic gastritis
intersection_of: DOID:4029 ! gastritis
intersection_of: OBO_REL:inheres_in CL:0000542 ! lymphocyte

[Term]
id: DOID:4278 ! basal cell carcinoma of the scrotum
intersection_of: DOID:3445 ! scrotal carcinoma
intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell

[Term]
id: DOID:4283 ! basal cell carcinoma of anal margin
intersection_of: DOID:4284 ! carcinoma of anal margin
intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell

[Term]
id: DOID:4287 ! basal cell carcinoma of external ear
intersection_of: DOID:4288 ! carcinoma of external ear
intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell

[Term]
id: DOID:4301 ! basal cell carcinoma of the vulva
intersection_of: DOID:1294 ! carcinoma of vulva
intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell

[Term]
id: DOID:4915 ! basophilic carcinoma
intersection_of: DOID:305 ! carcinoma
intersection_of: OBO_REL:inheres_in CL:0000767 ! basophil

[Term]
id: DOID:4935 ! acidophil carcinoma
intersection_of: DOID:305 ! carcinoma
intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil

[Term]
id: DOID:5139 ! cellular leiomyoma
intersection_of: DOID:127 ! fibroid tumor
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:5152 ! cellular neurofibroma
intersection_of: DOID:962 ! neurofibroma
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:5227 ! cellular blue nevus
intersection_of: DOID:2086 ! nevus, blue
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:5392 ! adenoma, acidophil
intersection_of: DOID:657 ! adenoma
intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil

[Term]
id: DOID:5500 ! cellular ependymoma
intersection_of: DOID:4844 ! ependymoma
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:5504 ! tanycytic ependymoma
intersection_of: DOID:4844 ! ependymoma
intersection_of: OBO_REL:inheres_in CL:0000643 ! tanycyte

[Term]
id: DOID:5692 ! cellular myxoid liposarcoma
intersection_of: DOID:5363 ! liposarcoma, myxoid
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:5698 ! fibroblastic liposarcoma
intersection_of: DOID:3382 ! liposarcoma
intersection_of: OBO_REL:inheres_in CL:0000057 ! fibroblast

[Term]
id: DOID:5737 ! primary myelofibrosis
intersection_of: DOID:4971 ! myelofibrosis
intersection_of: OBO_REL:inheres_in CL:0000556 ! megakaryocyte

[Term]
id: DOID:5742 ! acinar cell adenocarcinoma of the pancreas
intersection_of: DOID:4074 ! adenocarcinoma of the pancreas
intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell

[Term]
id: DOID:5834 ! spermatocytoma
intersection_of: DOID:4440 ! seminoma
intersection_of: OBO_REL:inheres_in CL:0000017 ! spermatocyte

[Term]
id: DOID:5870 ! eosinophilic pneumonia
intersection_of: DOID:552 ! pneumonia
intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil

[Term]
id: DOID:5974 ! transitional cell carcinoma of the renal pelvis
intersection_of: DOID:4919 ! carcinoma of renal pelvis
intersection_of: OBO_REL:inheres_in CL:0000731 ! urothelial cell

[Term]
id: DOID:6168 ! neural fibrolipoma
intersection_of: DOID:6169 ! fibrolipoma
intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron

[Term]
id: DOID:6262 ! follicular dendritic cell sarcoma
intersection_of: DOID:1115 ! sarcoma
intersection_of: OBO_REL:inheres_in CL:0000442 ! follicular dendritic cell

[Term]
id: DOID:6484 ! mediastinal melanocytic neurilemmoma
intersection_of: DOID:6175 ! mediastinal neurilemmoma
intersection_of: OBO_REL:inheres_in CL:0000148 ! melanocyte

[Term]
id: DOID:6530 ! cortical thymoma
intersection_of: DOID:3275 ! thymoma
intersection_of: OBO_REL:inheres_in CL:0000398 ! polygonal cell

[Term]
id: DOID:67 ! neural tissue disease
intersection_of: DOID:44 ! tissue disease
intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron

[Term]
id: DOID:7004 ! corticotroph adenoma
intersection_of: DOID:657 ! adenoma
intersection_of: OBO_REL:inheres_in CL:0000467 ! adrenocorticotropic hormone secreting cell

[Term]
id: DOID:7188 ! autoimmune thyroiditis
intersection_of: DOID:7166 ! thyroiditis
intersection_of: OBO_REL:inheres_in CL:0000542 ! lymphocyte

[Term]
id: DOID:7211 ! fibrous meningioma
intersection_of: DOID:3565 ! meningioma
intersection_of: OBO_REL:inheres_in CL:0000057 ! fibroblast

[Term]
id: DOID:7470 ! neural nevus
intersection_of: DOID:2681 ! nevus
intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron

[Term]
id: DOID:7607 ! chief cell adenoma
intersection_of: DOID:657 ! adenoma
intersection_of: OBO_REL:inheres_in CL:0000446 ! parathyroid hormone secreting cell

[Term]
id: DOID:7729 ! acinar cell cystadenocarcinoma
intersection_of: DOID:3111 ! cystadenocarcinoma
intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell

[Term]
id: DOID:7849 ! dendritic cell sarcoma, nos
intersection_of: DOID:1115 ! sarcoma
intersection_of: OBO_REL:inheres_in CL:0000451 ! dendritic cell

[Term]
id: DOID:8075 ! trichoblastic fibroma
intersection_of: DOID:181 ! fibroma
intersection_of: OBO_REL:inheres_in CL:0000299 ! trichoblast

[Term]
id: DOID:8082 ! cellular congenital mesoblastic nephroma
intersection_of: DOID:4773 ! congenital mesoblastic nephroma
intersection_of: OBO_REL:inheres_in CL:0000000 ! cell

[Term]
id: DOID:8527 ! unspecified monocytic leukemia
intersection_of: DOID:1240 ! leukemia
intersection_of: OBO_REL:inheres_in CL:0000576 ! monocyte

[Term]
id: DOID:8538 ! reticulosarcoma
intersection_of: DOID:353 ! lymphoma
intersection_of: OBO_REL:inheres_in CL:0000235 ! macrophage

[Term]
id: DOID:8683 ! myeloid sarcoma
intersection_of: DOID:1115 ! sarcoma
intersection_of: OBO_REL:inheres_in CL:0000094 ! granulocyte

[Term]
id: DOID:8760 ! megakaryocytic leukemia in remission
intersection_of: DOID:12039 ! leukemia (in remission)
intersection_of: OBO_REL:inheres_in CL:0000556 ! megakaryocyte

[Term]
id: DOID:8761 ! megakaryocytic leukemia
intersection_of: DOID:1240 ! leukemia
intersection_of: OBO_REL:inheres_in CL:0000556 ! megakaryocyte

[Term]
id: DOID:8884 ! unspecified monocytic leukemia in remission
intersection_of: DOID:12039 ! leukemia (in remission)
intersection_of: OBO_REL:inheres_in CL:0000576 ! monocyte

[Term]
id: DOID:9254 ! leukemia, mast-cell
intersection_of: DOID:1240 ! leukemia
intersection_of: OBO_REL:inheres_in CL:0000097 ! mast cell

[Term]
id: DOID:9515 ! plasmacytic leukemia in remission
intersection_of: DOID:12039 ! leukemia (in remission)
intersection_of: OBO_REL:inheres_in CL:0000786 ! plasma cell


--- NEW FILE: disease_xp_all-merged.obo ---
format-version: 1.2
date: 15:01:2010 16:32
subsetdef: goslim_candida "Candida GO slim"
subsetdef: goslim_generic "Generic GO slim"
subsetdef: goslim_goa "GOA and proteome slim"
subsetdef: goslim_pir "PIR GO slim"
subsetdef: goslim_plant "Plant GO slim"
subsetdef: goslim_pombe "Fission yeast GO slim"
subsetdef: goslim_yeast "Yeast GO slim"
subsetdef: gosubset_prok "Prokaryotic GO subset"
synonymtypedef: BRAND_NAME "BRAND NAME"
synonymtypedef: FORMULA "FORMULA"
synonymtypedef: InChI "InChI"
synonymtypedef: InChIKey "InChIKey"
synonymtypedef: INN "INN"
synonymtypedef: IUPAC_NAME "IUPAC NAME"
synonymtypedef: SMILES "SMILES"
synonymtypedef: systematic_synonym "Systematic synonym" EXACT
default-namespace: file:/Users/cjm/cvs/obo/ontology/phenotype/disease_xp/disease_xp_all.obo
[...531994 lines suppressed...]
namespace: file:/Users/cjm/cvs/obo/ontology/phenotype/disease_xp/relations_disease_xp.obo
xref: OBO_REL:inheres_in

[Typedef]
id: OBO_REL:inheres_in
name: inheres_in

[Typedef]
id: part_of
name: part_of
namespace: disease_ontology
xref: OBO_REL:part_of
is_transitive: true

[Typedef]
id: regulates
name: regulates
namespace: gene_ontology
transitive_over: part_of ! part_of

[Obo-phenotype-commits] obo/ontology/phenotype/disease_xp disease_xp_FMA.obo, 1.1, 1.2 disease_xp_cell.obo, 1.1, 1.2

From: Chris Mungall <cmungall@us...> - 2010-01-16 00:58

Update of /cvsroot/obo/obo/ontology/phenotype/disease_xp
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv32053

Modified Files:
	disease_xp_FMA.obo disease_xp_cell.obo 
Log Message:
FMA-CL

Index: disease_xp_FMA.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/disease_xp/disease_xp_FMA.obo,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** disease_xp_FMA.obo	16 Jan 2010 00:34:32 -0000	1.1
--- disease_xp_FMA.obo	16 Jan 2010 00:58:47 -0000	1.2
***************
*** 2,7563 ****
  id: DOID:0000000 ! gallbladder disease
  intersection_of: DOID:4 ! disease
! intersection_of: OBO_REL:inheres_in FMA:7202 ! gallbladder
  
  [Term]
  id: DOID:0000815 ! spleen disease
  intersection_of: DOID:4 ! disease
! intersection_of: OBO_REL:inheres_in FMA:7196 ! spleen
  
  [Term]
[...14806 lines suppressed...]
  
  [Term]
  id: DOID:9942 ! lymph node disorder
  intersection_of: DOID:4 ! disease
! intersection_of: OBO_REL:occurs_in FMA:5034 ! lymph node
  
  [Term]
  id: DOID:9986 ! lymphoma of orbit
  intersection_of: DOID:353 ! lymphoma
! intersection_of: OBO_REL:occurs_in FMA:53074 ! orbit
  
  [Term]
  id: DOID:9987 ! sarcoma of orbit
  intersection_of: DOID:1115 ! sarcoma
! intersection_of: OBO_REL:occurs_in FMA:53074 ! orbit
  
  [Term]
  id: DOID:9991 ! hemangiopericytoma of orbit
  intersection_of: DOID:264 ! hemangiopericytoma
! intersection_of: OBO_REL:occurs_in FMA:53074 ! orbit

Index: disease_xp_cell.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/disease_xp/disease_xp_cell.obo,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** disease_xp_cell.obo	16 Jan 2010 00:34:32 -0000	1.1
--- disease_xp_cell.obo	16 Jan 2010 00:58:47 -0000	1.2
***************
*** 3,326 ****
  id: DOID:1035 ! natural killer cell leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: OBO_REL:inheres_in CL:0000623 ! natural killer cell
  
  [Term]
  id: DOID:10361 ! eosinophilic meningitis
  intersection_of: DOID:9471 ! meningitis
! intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:11686 ! seborrheic keratosis of eyelid
  intersection_of: DOID:3175 ! papilloma of eyelid
! intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell
  
  [Term]
  id: DOID:12155 ! lymphocytic choriomeningitis
  intersection_of: DOID:9471 ! meningitis
! intersection_of: OBO_REL:inheres_in CL:0000542 ! lymphocyte
  
  [Term]
  id: DOID:12621 ! stem cell leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: OBO_REL:inheres_in CL:0000034 ! stem cell
  
  [Term]
  id: DOID:13922 ! eosinophilic esophagitis
  intersection_of: DOID:11963 ! esophagitis
! intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:2084 ! cellular angiofibroma
  intersection_of: DOID:3242 ! angiofibroma
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:2157 ! germ cell cancer
  intersection_of: DOID:162 ! cancer
! intersection_of: OBO_REL:inheres_in CL:0000586 ! germ cell
  
  [Term]
  id: DOID:2218 ! blood platelet disorders
  intersection_of: DOID:4 ! disease
! intersection_of: OBO_REL:inheres_in CL:0000233 ! platelet
  
  [Term]
  id: DOID:231 ! motor neuron disease
  intersection_of: DOID:4 ! disease
! intersection_of: OBO_REL:inheres_in CL:0000100 ! motor neuron
  
  [Term]
  id: DOID:2398 ! benign tumor of germ cell
  intersection_of: DOID:167 ! benign neoplasm
! intersection_of: OBO_REL:inheres_in CL:0000586 ! germ cell
  
  [Term]
  id: DOID:2412 ! skin tumor of neural origin
  intersection_of: DOID:3165 ! skin neoplasms
! intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron
  
  [Term]
  id: DOID:2417 ! melanocytic nevus
  intersection_of: DOID:2681 ! nevus
! intersection_of: OBO_REL:inheres_in CL:0000148 ! melanocyte
  
  [Term]
  id: DOID:2513 ! basal cell carcinoma
  intersection_of: DOID:3451 ! carcinoma of skin
! intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell
  
  [Term]
  id: DOID:2655 ! acinar cell adenoma
  intersection_of: DOID:657 ! adenoma
! intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:3025 ! acinar cell carcinoma
  intersection_of: DOID:305 ! carcinoma
! intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:3196 ! cellular schwannoma
  intersection_of: DOID:3192 ! neurilemmoma
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:3282 ! dendritic cell thymoma
  intersection_of: DOID:3275 ! thymoma
! intersection_of: OBO_REL:inheres_in CL:0000451 ! dendritic cell
  
  [Term]
  id: DOID:3372 ! chondroblastic osteosarcoma
  intersection_of: DOID:3347 ! osteosarcoma
! intersection_of: OBO_REL:inheres_in CL:0000058 ! chondroblast
  
  [Term]
  id: DOID:350 ! mastocytosis
  intersection_of: DOID:4 ! disease
! intersection_of: OBO_REL:inheres_in CL:0000097 ! mast cell
  
  [Term]
  id: DOID:3784 ! cellular fibroma
  intersection_of: DOID:181 ! fibroma
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:4030 ! eosinophilic gastritis
  intersection_of: DOID:4029 ! gastritis
! intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:4031 ! eosinophilic gastroenteritis
  intersection_of: DOID:2326 ! gastroenteritis
! intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:4035 ! lymphocytic gastritis
  intersection_of: DOID:4029 ! gastritis
! intersection_of: OBO_REL:inheres_in CL:0000542 ! lymphocyte
  
  [Term]
  id: DOID:4278 ! basal cell carcinoma of the scrotum
  intersection_of: DOID:3445 ! scrotal carcinoma
! intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4283 ! basal cell carcinoma of anal margin
  intersection_of: DOID:4284 ! carcinoma of anal margin
! intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4287 ! basal cell carcinoma of external ear
  intersection_of: DOID:4288 ! carcinoma of external ear
! intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4301 ! basal cell carcinoma of the vulva
  intersection_of: DOID:1294 ! carcinoma of vulva
! intersection_of: OBO_REL:inheres_in CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4915 ! basophilic carcinoma
  intersection_of: DOID:305 ! carcinoma
! intersection_of: OBO_REL:inheres_in CL:0000767 ! basophil
  
  [Term]
  id: DOID:4935 ! acidophil carcinoma
  intersection_of: DOID:305 ! carcinoma
! intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:5139 ! cellular leiomyoma
  intersection_of: DOID:127 ! fibroid tumor
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:5152 ! cellular neurofibroma
  intersection_of: DOID:962 ! neurofibroma
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:5227 ! cellular blue nevus
  intersection_of: DOID:2086 ! nevus, blue
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:5392 ! adenoma, acidophil
  intersection_of: DOID:657 ! adenoma
! intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:5500 ! cellular ependymoma
  intersection_of: DOID:4844 ! ependymoma
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:5504 ! tanycytic ependymoma
  intersection_of: DOID:4844 ! ependymoma
! intersection_of: OBO_REL:inheres_in CL:0000643 ! tanycyte
  
  [Term]
  id: DOID:5692 ! cellular myxoid liposarcoma
  intersection_of: DOID:5363 ! liposarcoma, myxoid
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:5698 ! fibroblastic liposarcoma
  intersection_of: DOID:3382 ! liposarcoma
! intersection_of: OBO_REL:inheres_in CL:0000057 ! fibroblast
  
  [Term]
  id: DOID:5737 ! primary myelofibrosis
  intersection_of: DOID:4971 ! myelofibrosis
! intersection_of: OBO_REL:inheres_in CL:0000556 ! megakaryocyte
  
  [Term]
  id: DOID:5742 ! acinar cell adenocarcinoma of the pancreas
  intersection_of: DOID:4074 ! adenocarcinoma of the pancreas
! intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:5834 ! spermatocytoma
  intersection_of: DOID:4440 ! seminoma
! intersection_of: OBO_REL:inheres_in CL:0000017 ! spermatocyte
  
  [Term]
  id: DOID:5870 ! eosinophilic pneumonia
  intersection_of: DOID:552 ! pneumonia
! intersection_of: OBO_REL:inheres_in CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:5974 ! transitional cell carcinoma of the renal pelvis
  intersection_of: DOID:4919 ! carcinoma of renal pelvis
! intersection_of: OBO_REL:inheres_in CL:0000731 ! urothelial cell
  
  [Term]
  id: DOID:6168 ! neural fibrolipoma
  intersection_of: DOID:6169 ! fibrolipoma
! intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron
  
  [Term]
  id: DOID:6262 ! follicular dendritic cell sarcoma
  intersection_of: DOID:1115 ! sarcoma
! intersection_of: OBO_REL:inheres_in CL:0000442 ! follicular dendritic cell
  
  [Term]
  id: DOID:6484 ! mediastinal melanocytic neurilemmoma
  intersection_of: DOID:6175 ! mediastinal neurilemmoma
! intersection_of: OBO_REL:inheres_in CL:0000148 ! melanocyte
  
  [Term]
  id: DOID:6530 ! cortical thymoma
  intersection_of: DOID:3275 ! thymoma
! intersection_of: OBO_REL:inheres_in CL:0000398 ! polygonal cell
  
  [Term]
  id: DOID:67 ! neural tissue disease
  intersection_of: DOID:44 ! tissue disease
! intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron
  
  [Term]
  id: DOID:7004 ! corticotroph adenoma
  intersection_of: DOID:657 ! adenoma
! intersection_of: OBO_REL:inheres_in CL:0000467 ! adrenocorticotropic hormone secreting cell
  
  [Term]
  id: DOID:7188 ! autoimmune thyroiditis
  intersection_of: DOID:7166 ! thyroiditis
! intersection_of: OBO_REL:inheres_in CL:0000542 ! lymphocyte
  
  [Term]
  id: DOID:7211 ! fibrous meningioma
  intersection_of: DOID:3565 ! meningioma
! intersection_of: OBO_REL:inheres_in CL:0000057 ! fibroblast
  
  [Term]
  id: DOID:7470 ! neural nevus
  intersection_of: DOID:2681 ! nevus
! intersection_of: OBO_REL:inheres_in CL:0000540 ! neuron
  
  [Term]
  id: DOID:7607 ! chief cell adenoma
  intersection_of: DOID:657 ! adenoma
! intersection_of: OBO_REL:inheres_in CL:0000446 ! parathyroid hormone secreting cell
  
  [Term]
  id: DOID:7729 ! acinar cell cystadenocarcinoma
  intersection_of: DOID:3111 ! cystadenocarcinoma
! intersection_of: OBO_REL:inheres_in CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:7849 ! dendritic cell sarcoma, nos
  intersection_of: DOID:1115 ! sarcoma
! intersection_of: OBO_REL:inheres_in CL:0000451 ! dendritic cell
  
  [Term]
  id: DOID:8075 ! trichoblastic fibroma
  intersection_of: DOID:181 ! fibroma
! intersection_of: OBO_REL:inheres_in CL:0000299 ! trichoblast
  
  [Term]
  id: DOID:8082 ! cellular congenital mesoblastic nephroma
  intersection_of: DOID:4773 ! congenital mesoblastic nephroma
! intersection_of: OBO_REL:inheres_in CL:0000000 ! cell
  
  [Term]
  id: DOID:8527 ! unspecified monocytic leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: OBO_REL:inheres_in CL:0000576 ! monocyte
  
  [Term]
  id: DOID:8538 ! reticulosarcoma
  intersection_of: DOID:353 ! lymphoma
! intersection_of: OBO_REL:inheres_in CL:0000235 ! macrophage
  
  [Term]
  id: DOID:8683 ! myeloid sarcoma
  intersection_of: DOID:1115 ! sarcoma
! intersection_of: OBO_REL:inheres_in CL:0000094 ! granulocyte
  
  [Term]
  id: DOID:8760 ! megakaryocytic leukemia in remission
  intersection_of: DOID:12039 ! leukemia (in remission)
! intersection_of: OBO_REL:inheres_in CL:0000556 ! megakaryocyte
  
  [Term]
  id: DOID:8761 ! megakaryocytic leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: OBO_REL:inheres_in CL:0000556 ! megakaryocyte
  
  [Term]
  id: DOID:8884 ! unspecified monocytic leukemia in remission
  intersection_of: DOID:12039 ! leukemia (in remission)
! intersection_of: OBO_REL:inheres_in CL:0000576 ! monocyte
  
  [Term]
  id: DOID:9254 ! leukemia, mast-cell
  intersection_of: DOID:1240 ! leukemia
! intersection_of: OBO_REL:inheres_in CL:0000097 ! mast cell
  
  [Term]
  id: DOID:9515 ! plasmacytic leukemia in remission
  intersection_of: DOID:12039 ! leukemia (in remission)
! intersection_of: OBO_REL:inheres_in CL:0000786 ! plasma cell
  
--- 3,326 ----
  id: DOID:1035 ! natural killer cell leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: develops_from CL:0000623 ! natural killer cell
  
  [Term]
  id: DOID:10361 ! eosinophilic meningitis
  intersection_of: DOID:9471 ! meningitis
! intersection_of: develops_from CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:11686 ! seborrheic keratosis of eyelid
  intersection_of: DOID:3175 ! papilloma of eyelid
! intersection_of: develops_from CL:0000646 ! basal cell
  
  [Term]
  id: DOID:12155 ! lymphocytic choriomeningitis
  intersection_of: DOID:9471 ! meningitis
! intersection_of: develops_from CL:0000542 ! lymphocyte
  
  [Term]
  id: DOID:12621 ! stem cell leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: develops_from CL:0000034 ! stem cell
  
  [Term]
  id: DOID:13922 ! eosinophilic esophagitis
  intersection_of: DOID:11963 ! esophagitis
! intersection_of: develops_from CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:2084 ! cellular angiofibroma
  intersection_of: DOID:3242 ! angiofibroma
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:2157 ! germ cell cancer
  intersection_of: DOID:162 ! cancer
! intersection_of: develops_from CL:0000586 ! germ cell
  
  [Term]
  id: DOID:2218 ! blood platelet disorders
  intersection_of: DOID:4 ! disease
! intersection_of: develops_from CL:0000233 ! platelet
  
  [Term]
  id: DOID:231 ! motor neuron disease
  intersection_of: DOID:4 ! disease
! intersection_of: develops_from CL:0000100 ! motor neuron
  
  [Term]
  id: DOID:2398 ! benign tumor of germ cell
  intersection_of: DOID:167 ! benign neoplasm
! intersection_of: develops_from CL:0000586 ! germ cell
  
  [Term]
  id: DOID:2412 ! skin tumor of neural origin
  intersection_of: DOID:3165 ! skin neoplasms
! intersection_of: develops_from CL:0000540 ! neuron
  
  [Term]
  id: DOID:2417 ! melanocytic nevus
  intersection_of: DOID:2681 ! nevus
! intersection_of: develops_from CL:0000148 ! melanocyte
  
  [Term]
  id: DOID:2513 ! basal cell carcinoma
  intersection_of: DOID:3451 ! carcinoma of skin
! intersection_of: develops_from CL:0000646 ! basal cell
  
  [Term]
  id: DOID:2655 ! acinar cell adenoma
  intersection_of: DOID:657 ! adenoma
! intersection_of: develops_from CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:3025 ! acinar cell carcinoma
  intersection_of: DOID:305 ! carcinoma
! intersection_of: develops_from CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:3196 ! cellular schwannoma
  intersection_of: DOID:3192 ! neurilemmoma
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:3282 ! dendritic cell thymoma
  intersection_of: DOID:3275 ! thymoma
! intersection_of: develops_from CL:0000451 ! dendritic cell
  
  [Term]
  id: DOID:3372 ! chondroblastic osteosarcoma
  intersection_of: DOID:3347 ! osteosarcoma
! intersection_of: develops_from CL:0000058 ! chondroblast
  
  [Term]
  id: DOID:350 ! mastocytosis
  intersection_of: DOID:4 ! disease
! intersection_of: develops_from CL:0000097 ! mast cell
  
  [Term]
  id: DOID:3784 ! cellular fibroma
  intersection_of: DOID:181 ! fibroma
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:4030 ! eosinophilic gastritis
  intersection_of: DOID:4029 ! gastritis
! intersection_of: develops_from CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:4031 ! eosinophilic gastroenteritis
  intersection_of: DOID:2326 ! gastroenteritis
! intersection_of: develops_from CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:4035 ! lymphocytic gastritis
  intersection_of: DOID:4029 ! gastritis
! intersection_of: develops_from CL:0000542 ! lymphocyte
  
  [Term]
  id: DOID:4278 ! basal cell carcinoma of the scrotum
  intersection_of: DOID:3445 ! scrotal carcinoma
! intersection_of: develops_from CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4283 ! basal cell carcinoma of anal margin
  intersection_of: DOID:4284 ! carcinoma of anal margin
! intersection_of: develops_from CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4287 ! basal cell carcinoma of external ear
  intersection_of: DOID:4288 ! carcinoma of external ear
! intersection_of: develops_from CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4301 ! basal cell carcinoma of the vulva
  intersection_of: DOID:1294 ! carcinoma of vulva
! intersection_of: develops_from CL:0000646 ! basal cell
  
  [Term]
  id: DOID:4915 ! basophilic carcinoma
  intersection_of: DOID:305 ! carcinoma
! intersection_of: develops_from CL:0000767 ! basophil
  
  [Term]
  id: DOID:4935 ! acidophil carcinoma
  intersection_of: DOID:305 ! carcinoma
! intersection_of: develops_from CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:5139 ! cellular leiomyoma
  intersection_of: DOID:127 ! fibroid tumor
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:5152 ! cellular neurofibroma
  intersection_of: DOID:962 ! neurofibroma
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:5227 ! cellular blue nevus
  intersection_of: DOID:2086 ! nevus, blue
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:5392 ! adenoma, acidophil
  intersection_of: DOID:657 ! adenoma
! intersection_of: develops_from CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:5500 ! cellular ependymoma
  intersection_of: DOID:4844 ! ependymoma
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:5504 ! tanycytic ependymoma
  intersection_of: DOID:4844 ! ependymoma
! intersection_of: develops_from CL:0000643 ! tanycyte
  
  [Term]
  id: DOID:5692 ! cellular myxoid liposarcoma
  intersection_of: DOID:5363 ! liposarcoma, myxoid
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:5698 ! fibroblastic liposarcoma
  intersection_of: DOID:3382 ! liposarcoma
! intersection_of: develops_from CL:0000057 ! fibroblast
  
  [Term]
  id: DOID:5737 ! primary myelofibrosis
  intersection_of: DOID:4971 ! myelofibrosis
! intersection_of: develops_from CL:0000556 ! megakaryocyte
  
  [Term]
  id: DOID:5742 ! acinar cell adenocarcinoma of the pancreas
  intersection_of: DOID:4074 ! adenocarcinoma of the pancreas
! intersection_of: develops_from CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:5834 ! spermatocytoma
  intersection_of: DOID:4440 ! seminoma
! intersection_of: develops_from CL:0000017 ! spermatocyte
  
  [Term]
  id: DOID:5870 ! eosinophilic pneumonia
  intersection_of: DOID:552 ! pneumonia
! intersection_of: develops_from CL:0000771 ! eosinophil
  
  [Term]
  id: DOID:5974 ! transitional cell carcinoma of the renal pelvis
  intersection_of: DOID:4919 ! carcinoma of renal pelvis
! intersection_of: develops_from CL:0000731 ! urothelial cell
  
  [Term]
  id: DOID:6168 ! neural fibrolipoma
  intersection_of: DOID:6169 ! fibrolipoma
! intersection_of: develops_from CL:0000540 ! neuron
  
  [Term]
  id: DOID:6262 ! follicular dendritic cell sarcoma
  intersection_of: DOID:1115 ! sarcoma
! intersection_of: develops_from CL:0000442 ! follicular dendritic cell
  
  [Term]
  id: DOID:6484 ! mediastinal melanocytic neurilemmoma
  intersection_of: DOID:6175 ! mediastinal neurilemmoma
! intersection_of: develops_from CL:0000148 ! melanocyte
  
  [Term]
  id: DOID:6530 ! cortical thymoma
  intersection_of: DOID:3275 ! thymoma
! intersection_of: develops_from CL:0000398 ! polygonal cell
  
  [Term]
  id: DOID:67 ! neural tissue disease
  intersection_of: DOID:44 ! tissue disease
! intersection_of: develops_from CL:0000540 ! neuron
  
  [Term]
  id: DOID:7004 ! corticotroph adenoma
  intersection_of: DOID:657 ! adenoma
! intersection_of: develops_from CL:0000467 ! adrenocorticotropic hormone secreting cell
  
  [Term]
  id: DOID:7188 ! autoimmune thyroiditis
  intersection_of: DOID:7166 ! thyroiditis
! intersection_of: develops_from CL:0000542 ! lymphocyte
  
  [Term]
  id: DOID:7211 ! fibrous meningioma
  intersection_of: DOID:3565 ! meningioma
! intersection_of: develops_from CL:0000057 ! fibroblast
  
  [Term]
  id: DOID:7470 ! neural nevus
  intersection_of: DOID:2681 ! nevus
! intersection_of: develops_from CL:0000540 ! neuron
  
  [Term]
  id: DOID:7607 ! chief cell adenoma
  intersection_of: DOID:657 ! adenoma
! intersection_of: develops_from CL:0000446 ! parathyroid hormone secreting cell
  
  [Term]
  id: DOID:7729 ! acinar cell cystadenocarcinoma
  intersection_of: DOID:3111 ! cystadenocarcinoma
! intersection_of: develops_from CL:0000622 ! acinar cell
  
  [Term]
  id: DOID:7849 ! dendritic cell sarcoma, nos
  intersection_of: DOID:1115 ! sarcoma
! intersection_of: develops_from CL:0000451 ! dendritic cell
  
  [Term]
  id: DOID:8075 ! trichoblastic fibroma
  intersection_of: DOID:181 ! fibroma
! intersection_of: develops_from CL:0000299 ! trichoblast
  
  [Term]
  id: DOID:8082 ! cellular congenital mesoblastic nephroma
  intersection_of: DOID:4773 ! congenital mesoblastic nephroma
! intersection_of: develops_from CL:0000000 ! cell
  
  [Term]
  id: DOID:8527 ! unspecified monocytic leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: develops_from CL:0000576 ! monocyte
  
  [Term]
  id: DOID:8538 ! reticulosarcoma
  intersection_of: DOID:353 ! lymphoma
! intersection_of: develops_from CL:0000235 ! macrophage
  
  [Term]
  id: DOID:8683 ! myeloid sarcoma
  intersection_of: DOID:1115 ! sarcoma
! intersection_of: develops_from CL:0000094 ! granulocyte
  
  [Term]
  id: DOID:8760 ! megakaryocytic leukemia in remission
  intersection_of: DOID:12039 ! leukemia (in remission)
! intersection_of: develops_from CL:0000556 ! megakaryocyte
  
  [Term]
  id: DOID:8761 ! megakaryocytic leukemia
  intersection_of: DOID:1240 ! leukemia
! intersection_of: develops_from CL:0000556 ! megakaryocyte
  
  [Term]
  id: DOID:8884 ! unspecified monocytic leukemia in remission
  intersection_of: DOID:12039 ! leukemia (in remission)
! intersection_of: develops_from CL:0000576 ! monocyte
  
  [Term]
  id: DOID:9254 ! leukemia, mast-cell
  intersection_of: DOID:1240 ! leukemia
! intersection_of: develops_from CL:0000097 ! mast cell
  
  [Term]
  id: DOID:9515 ! plasmacytic leukemia in remission
  intersection_of: DOID:12039 ! leukemia (in remission)
! intersection_of: develops_from CL:0000786 ! plasma cell