noch-user Mailing List for NOCH
Brought to you by:
chenmengen
You can subscribe to this list here.
2007 |
Jan
|
Feb
|
Mar
|
Apr
|
May
(2) |
Jun
|
Jul
|
Aug
(1) |
Sep
|
Oct
(1) |
Nov
|
Dec
|
---|---|---|---|---|---|---|---|---|---|---|---|---|
2010 |
Jan
|
Feb
|
Mar
(1) |
Apr
|
May
|
Jun
|
Jul
|
Aug
|
Sep
|
Oct
|
Nov
|
Dec
|
From: Sebastian B. <seb...@ep...> - 2010-03-04 10:09:55
|
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"> <html> <head> </head> <body bgcolor="#ffffff" text="#000000"> Hello (everyone?),<br> <br> I'm not too sure this is the right way to get help about using NOC, so please let me know if there's a better way.<br> <br> I wanted to get help with adding/constructing a molecule in NOC. What I have done so far is go to "Molecule" - "Add Chain/(New Mol)", entered a sequence (of 4 residues for example) and pressed "ok". The resutls is exactly what I wanted except for the fact that the first and last residues are not N- and C-terminal amino acids, respectively. Is there any way to specify that they should be terminal residues or to somehow mutate them into such residues after having been created?<br> <br> Any help would be greatly appreciated, thank you in advance for your time.<br> <br> <div class="moz-signature">-- <br> <a href="http://lcr.epfl.ch/page51995.html"> Sebastian Basso</a> <br> Laboratoire de Crystallographie <br> Institut de Physique des Systèmes Biologiques <br> Ecole Polytechnique Fédérale de Lausanne</div> </body> </html> |
From: emra H. <gro...@ya...> - 2007-10-17 17:16:52
|
Dear all How do I can visualized side chain - side chain hydrogen bonds in a pdb protein structure? (it's number and energy) __________________________________________________ Do You Yahoo!? Tired of spam? Yahoo! Mail has the best spam protection around http://mail.yahoo.com |
From: emra H. <gro...@ya...> - 2007-08-12 12:03:15
|
Dear all Is it possible to calculate charge (or electrostatic energy) of residues (or individual atoms) by NOC? Thanks --------------------------------- Looking for a deal? Find great prices on flights and hotels with Yahoo! FareChase. |
From: Ulrich B. <ulr...@ib...> - 2007-05-17 13:57:03
|
Dear all, I just started to work with NOC and have a questions: is there a possibility to calculate density maps on the fly from output mtz files from REFMAC or phenix? They contain bulk-solvent corrected, sigmaa-weighted map coefficients and phases for difference and 2Fo-Fc maps. I probably would work similar to coot, so that you can pick the mtz columns in a pop-sip window. Another question is about the implementation of hardware stereo: I picked "hardware stereo at next start" but nothing happens. I have NVIDIA Quadro FX3500, stereo works well under coot and pymol and O (running windows XP, btw). Many thanks, Ulrich |
From: chenmengen <che...@ya...> - 2007-05-16 19:47:03
|
confirm 0b883373b7002758e50db61ce4b2d97641ba5ac8 |