Showing page 1 of 29.

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  SAM tools

  SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAM tools provide efficient utilities on manipulating alignments in the SAM format.

  1,287 weekly downloads
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  KH Coder

  Quantitative Content Analysis or Text Data Mining

  505 weekly downloads
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  Fast Artificial Neural Network Library

  Fast Artificial Neural Network Library is a free open source neural network library, which implements multilayer artificial neural networks in C with support for both fully connected and sparsely connected networks. Cross-platform execution in both fixed and floating point are supported. It includes a framework for easy handling of training data sets. It is easy to use, versatile, well documented, and fast. Bindings to more than 15 programming languages are available. An easy to read introduction article and a reference manual accompanies the library with examples and recommendations on how to use the library. Several graphical user interfaces are also available for the library.

  550 weekly downloads
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  Primer3 - PCR primer design tool

  Design PCR primers from DNA sequence. Widely used (190k Google hits for "primer3"). From mispriming libraries to sequence quality data to the generation of internal oligos, primer3 does it. C&perl. Developers/testers/documenters needed.

  338 weekly downloads
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  owfs and owhttpd

  Easy way to use the 1-wire sensors like temperature, voltage and more.

  261 weekly downloads
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  CARE2X php Integ Hospital Info System

  Integrated Hospital Information System. PHP,mySQL,PostgreSQL. Surgery, Nursing,Outpatient,Wards,Labs, Pharmacy, Security,Admission,Schedulers, Repair, Communication & more. Multilanguage, WYSIWYG forms, userconfig, embedded workbots. Modular & scalab

  233 weekly downloads
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  TA-Lib : Technical Analysis Library

  Technical Analysis Library

  345 weekly downloads
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  CDMEDIC PACS WEB

  Full featured free PACS based on dcm4chee and mysql, with remote web accession available for Linux in Debian packaging format for x86 32 and 64 bit processors. (KEYWORDS: PACS,DICOM,HL7,WORK LIST)

  246 weekly downloads
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  SASHIMI

  The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to our open mzXML format.

  201 weekly downloads
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  vcftools

  A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project

  308 weekly downloads
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  Universal JTAG library, server and tools

  UrJTAG aims to create an enhanced, modern tool for communicating over JTAG with flash chips, CPUs, and many more. It is a descendant of the popular openwince JTAG tools with a lot of additional features and enhancements.

  174 weekly downloads
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  Arabeyes

  Arabeyes is a Meta project that is aimed at fully supporting the Arabic language in the Unix/Linux environment. It is designed to be a central location to standardize the Arabization process. Arabeyes relies on voluntary contributions.

  261 weekly downloads
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  FreeMED

  GPL-licensed Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features

  172 weekly downloads
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  DD Thought Tickler

  DD Thought Tickler is a thinking process recorder. It is a kind of vector graphics editor and idea processor. It has new function not ever known. It records your thinking process, by memorizing every steps that you've operated on this tool.

  238 weekly downloads
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  AMOS

  AMOS is a collection of tools and class interfaces for the assembly of DNA reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation.

  104 weekly downloads
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  Ham Radio Control Libraries

  Library to control radio transceivers and receivers

  135 weekly downloads
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  gputils

  gputils is a collection of tools for Microchip PIC microcontrollers. Its goal is to be fully compatible with Microchip's tools, MPASM, MPLINK, and MPLIB.

  174 weekly downloads
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  MUMmer

  MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.

  125 weekly downloads
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  Generic Model Organism Database Project

  GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.

  120 weekly downloads
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  Gene Ontology

  The home of the Gene Ontology project on SourceForge, including ontology requests, software downloads, bug trackers, and much, much more.

  97 weekly downloads
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  SystemImager

  SystemImager is software that makes the installation of Linux to masses of similar machines relatively easy. It makes software distribution, configuration, and operating system updates easy, and can also be used for content distribution.

  106 weekly downloads
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  Perl Data Language

  The PDL module gives standard perl the ability to COMPACTLY store and SPEEDILY manipulate the large N-dimensional data sets that are the bread and butter of scientific computing.

  64 weekly downloads
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  xoscope: digital oscilloscope

  xoscope is a digital oscilloscope using input from a sound card or EsounD and/or a ProbeScope/osziFOX and will soon support Bitscope hardware. Includes 8 signal displays, variable time scale, math, memory, measurements, and file save/load.

  90 weekly downloads
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  XASTIR

  Real-time tracking & messaging of stations via radio/internet APRS data streams, w/125 map formats supported. Linux/FreeBSD/Solaris/MacOSX/Windows in any of 7 languages. Can also be used for mobile mapping w/GPS. MAILING LISTS ARE AT: PROJECT->WEB SITE.

  70 weekly downloads
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  Trinity RNA-Seq Assembly

  The Trinity RNA-Seq Assembly project provides software solutions targeted to the reconstruction of full-length transcripts and alternatively spliced isoforms from Illumina RNA-Seq data.

  256 weekly downloads

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