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  FreeMat

  Freemat is an interpreted, matrix-oriented development environment for engineering and scientific applications, similar to the commercial package MATLAB. Freemat provides visualization, image manipulation, and plotting as well as parallel programming.

  2,445 weekly downloads
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  Automatically Tuned Linear Algebra Soft.

  ATLAS (Automatically Tuned Linear Algebra Software) provides highly optimized Linear Algebra kernels for arbitrary cache-based architectures. ATLAS provides ANSI C and Fortran77 interfaces for the entire BLAS API, and a small portion of the LAPACK AP

  1,016 weekly downloads
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  eclim (eclipse + vim)

  Eclim is a set of eclipse and vim plugins to integrate the two projects.

  493 weekly downloads
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  Elmer finite element software

  Elmer is a finite element software for numerical solution of partial differential equations and multiphysical problems. It includes models of structural mechanics, fluid dynamics, heat transfer, electromagnetics etc. Elmer home is www.csc.fi/elmer

  400 weekly downloads
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  Staden Package

  A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.

  219 weekly downloads
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  GeographicLib

  Geographic library

  202 weekly downloads
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  APBS

  APBS is a software package for the numerical solution of the Poisson-Boltzmann equation, a popular continuum model for describing electrostatic interactions between molecular solutes over a wide range of length scales. <http://www.poissonboltzmann.org/>.

  125 weekly downloads
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  Climate Data Analysis Tools

  Ultrascale Visualization Climate Data Analysis Tools

  73 weekly downloads
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  XDrawChem

  XDrawChem is a drawing application designed for drawing and analyzing chemical structures and reactions.

  174 weekly downloads
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  PyLab: A place to release Python tools

  This will be a place to release tools that have not yet been added to SciPy (or will not be added for whatever reason). Currently an interface to ImageMagick is here.

  75 weekly downloads
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  IFEFFIT: Interactive XAFS Analysis

  IFEFFIT is a library and set of interactive programs for the analysis of x-ray absorption fine-structure (XAFS) data. IFEFFIT combines state-of-the-art analysis algorithms with graphical display of XAFS data, and general data manipulation. It can be

  124 weekly downloads
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  Systems Biology Software Project

  This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.

  25 weekly downloads
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  Time Ephemerides

  Calculate time ephemerides in convenient form

  43 weekly downloads
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  Perl-speaks-NONMEM

  Perl-speaks-NONMEM (PsN) is a set of Perl modules that makes it easier to call the NONMEM program from within other programs. PsN is intended as the basis for a development of tools for computer intensive methods.

  40 weekly downloads
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  SWAN

  SWAN is a third-generation wave model, developed at Delft University of Technology, that computes random, short-crested wind-generated waves in coastal regions and inland waters.

  58 weekly downloads
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  Earth System Modeling Framework

  The Earth System Modeling Framework provides high-performance software infrastructure and superstructure for the construction and coupling of climate, weather, and data assimilation applications.

  11 weekly downloads
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  MICROMECHANICS

  A collection of lecture notes and accompanying code on micromechanics

  16 weekly downloads
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  Advanced Numerical Instruments 2D

  Advanced numerical instruments: adaptive meshing, FE methods, solvers

  28 weekly downloads
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  Pysces

  PySCeS is the Python Simulator of Cellular Systems. For a network of coupled reactions it does a stoichiometric matrix analysis, calculates the time course and steady state, and does a complete control analysis.

  9 weekly downloads
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  General Knowledge Machine Project

  The volume of actual knowledge prevents people from applying it, because even the cleverest persons can not learn everything they need. Try to overturn this with idea of Just-In-Time Knowledge. Intelligent e-knowledge base engine provided.

  14 weekly downloads
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  MRCWA

  MRCWA - Multilayer Rigorous Coupled Wave Analysis is a fast, flexible optical grating solver. It calculates an exact solution to the Maxwell equations for the diffraction of light from an optical grating with arbitrary profile and materials.

  7 weekly downloads
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  A FORTRAN 90 Numerical Library

  A FOTRAN 90 Numerical library (AFNL) is a set of MODULES containing definitions of Fourier series and polynomials, and able to perform linear (multi-)dimensional fittings, integrals, sorting data, compute roots of functions, and other numerical tasks.

  11 weekly downloads
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  The R Project

  Statistical computing and graphics software.

  18 weekly downloads
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  DISCUS simulation package

  DISCUS is a set of programs to simulate the atomic structure of disordered materials and calculate experimental properties such as diffuse scattering or the atomic pair distribution function.

  17 weekly downloads
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  cca-forum

  Cca-forum unifies the Common Component Architecture tools and tutorial. It includes the CCA specifications, the Ccaffeine framework for HPC, and related tools. These support multilanguage scientific and parallel computing.

  9 weekly downloads

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