Open Source Python Scientific/Engineering Software for Linux - Page 2

Pretty Damn Quick (PDQ) analytically solves queueing network models of computer and manufacturing systems, data networks, etc., written in conventional programming languages. Generic or customized reports of predicted performance measures are output.

ProcessViewBrowser & ProcessViewServer represent an OpenSource attempt to industrial process visualization. It is based on Qt and is very portable. (Now also available as commercial software)

The Protein Geometry Database hosts the development code for a flexible database for searching protein geometry, as well as a library for accessing this data for protein modeling & refinement programs.

Abandoned version of qbc. DOES NOT WORK properly

Design and develop Recommendation and Adaptive Prediction Engines to address eCommerce opportunities. Build a portfolio of engines by creating and porting algorithms from multiple disciplines to a usable form. Try to solve NetFlix and other challenges.

Soma - System Omnichannel Marketing Analysis is an open-source solution for simplifying the processes of analyzing and predicting consumer behavior. With Soma, you can combine data from multiple systems and channels in the profile joining process. Interactions and behaviors registered as a part of a unique user create and show what a Customer Journey looks like. The data is subjected to an analysis process which enables the examination of the significance of individual touchpoints for the purchasing process.

Some More Individual - Yes! A couple of projects around Semantic Web technologies to help to establish a better accessible Web and personalize this access.

This project exists as a central meeting place for those wishing to share in-house developed applications and tools for local government (and related industries) in Australia.

The Stats Jam project is an extension to Mediawiki that allows users to embed database queries and visualisations into their wiki pages.

Synthetic Biology Software Suite (SynBioSS) is composed of a wiki for biochemical kinetic constants, a graphical interface for simulating synthetic biological pathways, and a simulator that runs on either a desktop or supercomputer.

Data mines the voting record and other actions of Members of the UK Parliament. Extracts information from the parliament website and stores it in a database. Provides tools to analyse the information, producing statistics and tables about the MPs.

A building control system which includes an Access control database combined with a easy graphical user interface. This system includes at conception, an array of controllers and sensors to allow the monitoring of occupancy, access, lighting and HVAC.

The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of heterozygosity (LOH) events in Candida albicans, the most common human fungal pathogen, we developed a pipeline for analyzing diverse genome-scale datasets from microarray, deep sequencing, and restriction site associated DNA sequence experiments for clinical and laboratory strains. The YMAP pipeline automatically illustrates genome-wide information in a single intuitive figure and is readily modified for the analysis of other categories of data and other pathogen species with small genomes.

Codecracker is an automated judge that is used to run coding contests. It is developed by the GNU/Linux Users' Group of NIT Durgapur, India.

A toolbox of open source geospatial essentials

Healthcare Xchange Protocol for interoperative communications. Data exchange/transfer, platform independent,XML-RPC, HL7, SOAP, EDIFACT, simple,easy, authenticated, secure, transparent, no geo-restrictions, open sourced, peer reviewed, collab development

a webbased multiuser bibliography management tool. it allows to convert to bibtex, bibtexml and other formats such as html, text,.. the user is allowed to define own formats via xsl style sheets. anonymous users can be allowed to browse lists

A collection of software made by Milos Rancic.

minITIL is an open source implementation intended to create a solid framework for building applications needed in real life deployments of Information Technology services based on ITIL framework.

This software presents a flexible and configurable proposal for monitoring and management of real and virtual HPC infrastructures, compatible with paradigm of cloud computing. We help you to answer: 1) What is the performance of my resources? 2) What equipment and resources do we have already? 3) What do we need to upgrade or repair? 4) What can we consolidate to reduce complexity or reduce energy use? 5) What resources would be better reused somewhere else? Status: PreAlpha, so any help shall be welcome. Made for LINUX. GNU General Public License version 3.0 (GPLv3)

Forked Ubuntu 14.04 minimal install with XOrg and FluxBox desktop environment for web-based pipeline construction and job submission. HOWTO: 1) Set VM network settings to a bridged adapter type. 2) Load VM to client 3) From host: $ ssh -X ubuntu@<foobar> 'firefox && butterfly.server.py --unsecure' --- passwd = 616287xx 5) or ssh into host with X forwarding, and type runme This will launch an X-session of Firefox on the client, which will then be forwarded to the host. The first homepage tab links to our pipeline constructer. The second homepage tab links to a xterm session on the client. Software included (location - name): path - biobambam path - bwa path - bowtie2 path - bowtie path - cufflinks path - bcftools path - tophat path - scalpel path - samtools path - sra-toolkit path - bamtools path - delly path - delly-parallel path - picard-tools path - fastahack path - twoBitToFa ~/prog/java/ - mutect ~/prog/python/ - platypus ~/prog/java/ - gatk

UTS: Unified Telescope System. A modular system for controlling astronomical observatories.