Science & Engineering
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APBS APBS is a software package for the numerical solution of the Poisson-Boltzmann equation, a popular continuum model for describing electrostatic interactions between molecular solutes over a wide range of length scales. <http://www.poissonboltzmann.org/>.
135 weekly downloads -
GeographicLib Geographic library
202 weekly downloads -
AquaTerm (Mac OS X graphics terminal) AquaTerm is a Mac OS X grahics renderer. It allows command line applications written in ObjC, C, FORTRAN, Lisp, Perl or Python to display vector graphics, text and images using a simple API. Adapters for gnuplot, PGPLOT, and PLplot exists as well.
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Climate Data Analysis Tools Ultrascale Visualization Climate Data Analysis Tools
59 weekly downloads -
PyLab: A place to release Python tools This will be a place to release tools that have not yet been added to SciPy (or will not be added for whatever reason). Currently an interface to ImageMagick is here.
58 weekly downloads -
IFEFFIT: Interactive XAFS Analysis IFEFFIT is a library and set of interactive programs for the analysis of x-ray absorption fine-structure (XAFS) data. IFEFFIT combines state-of-the-art analysis algorithms with graphical display of XAFS data, and general data manipulation. It can be
99 weekly downloads -
Pysces PySCeS is the Python Simulator of Cellular Systems. For a network of coupled reactions it does a stoichiometric matrix analysis, calculates the time course and steady state, and does a complete control analysis.
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Advanced Numerical Instruments 2D Advanced numerical instruments: adaptive meshing, FE methods, solvers
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cca-forum Cca-forum unifies the Common Component Architecture tools and tutorial. It includes the CCA specifications, the Ccaffeine framework for HPC, and related tools. These support multilanguage scientific and parallel computing.
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SpacePy Space Science library for Python - contains superposed epoch classes, drift shell tracing, access to magnetic field models, streamline tracing, bootstrap confidence limits, time and coordinate conversions, etc.
4 weekly downloads -
WEST WEST (Wind Energy Simulation Toolkit) is a wind simulation application. It can be use to obtain high resolution results at various altitudes.
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NLPy A Python environment for large and sparse linear and nonlinear optimization using intuitive interfaces to linear algebra tools and subproblem solvers written in low-level languages. It provides building blocks to experiment with new ideas and algorithms.
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Pydusa- Parallel Programming in Python Pydusa is a package for parallel programming using Python. It contains a module for doing MPI programming in Python. We have added parallel solver packages such as Parallel SuperLU for solving sparse linear systems.
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GRIB API Add-ons to the ECMWF GRIB API. This project is about developing and maintaining add-ons to the GRIB API, like language bindings or documentation. The main GRIB API page is at http://www.ecmwf.int/products/data/software/grib_api.html
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LINARP LINARP - Linarp Is Not A Rietveld Program; Software for the analysis of crystallographic data
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MetabolODE MetabolODE derives, solves, and optimizes a set of differential equations describing the metabolic flux through any biochemical pathway.
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Parallel Seismic Earth Imaging System The Parallel Seismic Earth Imaging System (PSEIS) is designed for geophysical research and parallel processing of large datasets. Interoperation and emulation are used to leverage other seismic processing software, existing skills and infrastructure.
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VectTens A library for handling vectors, tensors, and more.
0 weekly downloads