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  Avogadro

  Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture.

  1,410 weekly downloads
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  QPDF

  QPDF is a C++ library and set of programs that inspect and manipulate the structure of PDF files. It can encrypt and linearize files, expose the internals of a PDF file, and do many other operations useful to end users and PDF developers.

  422 weekly downloads
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  AMOS

  AMOS is a collection of tools and class interfaces for the assembly of DNA reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation.

  89 weekly downloads
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  MUMmer

  MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.

  111 weekly downloads
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  Vipul's Razor

  Vipul's Razor is a distributed, collaborative, spam detection and filteringnetwork. The primary focus of the system is to identify anddisable an email spam before its injection and processingis complete.

  90 weekly downloads
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  collectl

  Collectl is a light-weight performance monitoring tool capable of reporting interactively as well as logging to disk. It reports statistics on cpu, disk, infiniband, lustre, memory, network, nfs, process, quadrics, slabs and more in easy to read format.

  113 weekly downloads
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  Citrus Perl

  Binary Perl Distribution

  136 weekly downloads
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  collectl-utils

  These utilities expand collectl's capabilities. Colplot provides web- or X-based plotting, colmux multiplexes output from multiple machines into a single stream and colgui displays real-time graphics. See screen shots for more details.

  30 weekly downloads
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  xuse requirements & use case management

  Xuse manages requirements, use cases & other artefacts that drive software design. Xuse focuses on clear documentation & communication. It defines an XML data model for requirements & use cases with XSLT providing multiple derived views: HTML/SVG/PDF

  21 weekly downloads
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  Nessconnect

  Nessconnect is a GUI, CLI and API client for Nessus and Nessus compatible servers. With an improved user interface, it provides local session management, scan templates, report generation through XSLT, charts and graphs, and vulnerability trending.

  10 weekly downloads
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  gfeed

  gfeed is a gtk+-2.0 based RSS/RDF feed reader. It currently supports most basic RSS/RDF feeds that do not include html. It is not designed to be an aggregator but a simple, light reader to be integrated into your desktop.

  34 weekly downloads
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  Jetcat - the Java NetCat

  Yet another re-implementation of (some of) the functionality of NetCat (nc) in Java. Focussing on realtime data-stream reflection and replication.

  7 weekly downloads
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  IRC Channel Relay Bot

  This bot relays messages from one IRC network to another. It will relay messages on a channel to the same channel on other servers or to differently named channels. Can also relay private messages, topic changes, etc.

  18 weekly downloads
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  Selective File Dumper

  This is a computer forensics useful tool written in bash script for Linux systems. It's fast and selective, you can retrieve all the files of the file type you choose with only one tool referenced, deleted and unallocated in very fast way.

  18 weekly downloads
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  Pre-defined Compiler Macros

  Overview of pre-defined compiler macros for standards, compilers, operating systems, and hardware architectures.

  6 weekly downloads
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  Punchout! Timecard System

  Punchout! is a simple and straightforward time clock system that allows an administrator to set up multiple clients each with their own pay rate. The user can then punch the Punch In! or Punch Out! button to track their hours and pay.

  15 weekly downloads
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  scripts4cf

  This is a collector site of tools and scripts for the digital forensics. http://scripts4cf.sf.net

  8 weekly downloads
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  Webtunnel

  Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.

  14 weekly downloads
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  innotop

  innotop is a powerful monitor for MySQL queries and status information. It is now hosted at http://code.google.com/p/innotop.

  13 weekly downloads
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  CloudBurst

  CloudBurst is a parallel read-mapping algorithm optimized for mapping next-generation sequence data to the human genome and other reference genomes, for use in a variety of biological analyses including SNP discovery, genotyping, and personal genomics.

  12 weekly downloads
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  RDF Software Introspector

  The Introspector enables the programming tools that deal with source code such as the compiler to communicate in a standard and neutral manner reducing the accidental cost of programming. http://github.com/h4ck3rm1k3/

  12 weekly downloads
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  bindiff

  A tool for finding differences in binary files.

  9 weekly downloads
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  sybil

  Sybil is a web-based software package for comparative genomics

  9 weekly downloads
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  Debian 32bit VBox

  Learn Linux sysadmin from Windows PC using this Debian Virtual Box

  8 weekly downloads
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  ergatis

  Ergatis is a web-based utility used to create, run, and monitor reusable computational analysis pipelines, utilizing the Workflow engine. It contains pre-built components for common bioinformatics analysis tasks.

  8 weekly downloads

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