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Copy Number Analysis for Targeted Resequencing (CONTRA) is a tool for copy number variation (CNV) detection for targeted resequencing data such as those from whole-exome capture data.47 weekly downloads
Aberration detection in tumour exome10 weekly downloads
This package, for R environment, detects DAE peaks ratio on data gotten from LightCycler instrument.3 weekly downloads
CORe microBiome Analysis Tools2 weekly downloads
An R package that performs forward-backward fragment assembling segmentation. Reference: BMC Bioinformatics. 2007 May 3;8:145.2 weekly downloads
The package generates a feature table from a batch of LC/MS spectra in .cdf format. Instructions: http://www.sph.emory.edu/apLCMS/ References Bioinformatics. 25(15):1930-36. BMC Bioinformatics. 11:559.2 weekly downloads
A pipeline to define allele-specific genomic features1 weekly downloads
Ericscript is a computational framework to detect gene fusions from paired end RNA-seq data with high sensitity and specificity.1 weekly downloads
Population simulator to solve next generation sequencing questions1 weekly downloads
MGARCH is a software library for R-Project to simulate and estimate various MGARCH processes. This project also provides convenience tools for preparing data, summarizing and visualizing results, prediction and documentation.1 weekly downloads
An R package to normalise, classify and analyses raw AFLP data.
Beer festival cellar management database and related software.
This project supports the development of the Land Use Scenario DevelopeR (LUSDR) software package. LUSDR is an integrated land use and transportation modeling application which uses stochastic methods to simulate multiple possible futures.
Criação/Manutenção/Utilização de banco de dados da MegaSena.