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Geographic library375 weekly downloads
APBS is a software package for the numerical solution of the Poisson-Boltzmann equation, a popular continuum model for describing electrostatic interactions between molecular solutes over a wide range of length scales. <http://www.poissonboltzmann.org/>. Please register at http://goo.gl/LGVU5j before downloading!112 weekly downloads
RMG is an automatic chemical reaction mechanism generator that constructs kinetic models composed of elementary chemical reaction steps using a general understanding of how molecules react (currently limited to C, H, O, and S atoms).68 weekly downloads
BlockIt provides a Python framework to scan and parse a program file into constituent nested blocks, however defined, forming a block tree of your code and can be used as a mechanism to "extend" in some sense, the underlying programming language.2 weekly downloads
FortWrap is a python script that parses Fortran 90/95/200X source files and generates wrapper code in the form of C++ classes. FortWrap is intended to be used with object oriented Fortran code that makes use of Fortran derived types.2 weekly downloads
A model of the water, C, nutrients and microbial communities of the Amazon River. This project is still in development, the code may not be functional at this time. Most recent code version is under Files, labeled ROCA-date3 weekly downloads
Note: This project is no longer maintained. A newer version of the program is at https://code.google.com/p/digest2/. Statistical ranging for short arc moving object astrometry. Accepts atstrometry in MPC 80 charcater observation format, rates objects on likelyhood that they are yet-unknown near Earth objects.2 weekly downloads
Application Integration for HPC Multiphysics1 weekly downloads
This project aims to develop the compression SPH code can deal with the multi-phase surface motion problem. The code can simulate the wave surface tracking, wave breaking and wave interaction with structure.
The epler project's main intention is to provide a library with bindings to C++, and eventually C, Python and Fortran for manipulating, analyzing and visualizing large datasets. Building frontends on top of this isolated library is also planned.
MetabolODE derives, solves, and optimizes a set of differential equations describing the metabolic flux through any biochemical pathway.
This tools produces Gnu Make dependencies for Fortran Source files. The Fortran source files can be in fixed (f77) or free (f90) format. It generates dependencies for include file, #include files and modules.
Libquadratic provides methods for automatic numerical integration with various backends, strategies, error approximation models and mappings with special emphasis on line-integrals in the complex plane. Language bindings are currently in C++.