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APBS is a software package for the numerical solution of the Poisson-Boltzmann equation, a popular continuum model for describing electrostatic interactions between molecular solutes over a wide range of length scales. <http://www.poissonboltzmann.org/>. Please register at http://goo.gl/LGVU5j before downloading!210 weekly downloads
Data Analysis, Simulations and Visualization on the Sphere69 weekly downloads
Ultrascale Visualization Climate Data Analysis Tools41 weekly downloads
UPS is a source level C, C++ and Fortran debugger with an X windows interface. It's a very light debugger, but is quite efficient and works well. An ANSI compliant C interpreter is included.4 weekly downloads
The volume of actual knowledge prevents people from applying it, because even the cleverest persons can not learn everything they need. Try to overturn this with idea of Just-In-Time Knowledge. Intelligent e-knowledge base engine provided.3 weekly downloads
FDS and Smokeview Development has moved to http://fire.nist.gov/fds please update your bookmarks.5 weekly downloads
PsiLAB is an environment for scientific research, numerical calculations and generic data analysis. It's written in the functional language O'CaML.4 weekly downloads
Trek7 the original multiplayer network star trek game from the early-mid 70s. We are hoping to revive this classic (no, its not netrek/mtrek, not even close). hopefully the SF community can help port this to modern day networks.1 weekly downloads
Dodona is a molecular dynamics program which aims to treat nanostructures. It is provided with a basic interpretater language and can easily be extended with plugins. It supports basic matrix and vector manipulation in a Matlab/Octave-fashion way.
The Parallel Seismic Earth Imaging System (PSEIS) is designed for geophysical research and parallel processing of large datasets. Interoperation and emulation are used to leverage other seismic processing software, existing skills and infrastructure.
ProgPorts is an administrative and easy user interface to hundreds of proteomics, molecular dynamics, and protein crystallography programs. It is a hybrid of the prog/setup system, developed at Johns Hopkins University, and GNU-Darwin ports system.
Common Gateway Interface Library.